iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017526

Ensembl Protein ID

Bra000274.1-P

UniProt Accession

M4C7U6; M4C7U6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000274	Bra000274.1	Bra000274.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	32.35	1.20e-01	32.70	IUUC-Sce-106376
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	32.35	1.20e-01	32.70	IUUC-Sce-106376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSLKREFRKS RYSRLLFCQH KKGSSSSASA NDYPSSSSGK RKRLSDRRGD SLDLFPSWNL 60
EREAADMLLE RLSKKPPSLV DLCVRLAIDN VRYIGYVGGV DFQLLEKILQ HCTLEQLMHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTAA AACGCGAGTT TAGAAAATCG CGTTATTCTA GACTTTTATT TTGTCAACAC 60
AAAAAAGGCT CATCGTCATC GGCGTCTGCT AACGATTATC CATCTTCTTC TTCGGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010684--RNA_pol_II_trans_fac_SIII_A

Pfam

PF06881--Elongin_A

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001705	Ailuropoda melanoleuca	39.34	1.00e-06	48.50
IUUC-Apl-003659	Anas platyrhynchos	32.26	9.00e-08	52.00
IUUC-Aca-004513	Anolis carolinensis	31.18	5.00e-07	49.70
IUUC-Ago-007835	Ashbya gossypii	24.31	4.00e-05	42.00
IUUC-Acl-008085	Aspergillus clavatus	30.00	7.00e-05	41.20
IUUC-Afu-008931	Aspergillus fumigatus	34.78	4.00e-04	38.90
IUUC-Ani-009161	Aspergillus nidulans	24.63	4.00e-05	41.60
IUUC-Ang-009875	Aspergillus niger	25.55	2.00e-03	36.20
IUUC-Ame-011668	Astyanax mexicanus	33.82	1.00e-07	51.60
IUUC-Bgr-012160	Blumeria graminis	27.73	3.00e+00	28.50
IUUC-Bci-014000	Botrytis cinerea	29.63	3.00e-03	35.80
IUUC-Bdi-014527	Brachypodium distachyon	42.42	7.00e-32	130.00
IUUC-Bol-016438	Brassica oleracea	93.92	0.00e+00	675.00
IUUC-Cel-018281	Caenorhabditis elegans	26.58	5.00e-10	58.50
IUUC-Cja-018759	Callithrix jacchus	37.70	6.00e-06	46.20
IUUC-Cfa-020766	Canis familiaris	39.34	7.00e-07	48.90
IUUC-Cpo-022250	Cavia porcellus	40.98	3.00e-07	50.10
IUUC-Csa-023293	Chlorocebus sabaeus	37.70	2.00e-06	47.80
IUUC-Cin-025556	Ciona intestinalis	28.85	1.00e-06	48.10
IUUC-Csv-026153	Ciona savignyi	29.03	2.00e-05	42.00
IUUC-Cgl-026733	Colletotrichum gloeosporioides	29.29	1.00e-04	40.40
IUUC-Dre-027828	Danio rerio	28.66	1.00e-11	64.70
IUUC-Dme-031809	Drosophila melanogaster	30.61	3.00e-08	53.50
IUUC-Ete-032677	Echinops telfairi	32.26	2.00e-08	53.90
IUUC-Eca-034045	Equus caballus	33.33	3.00e-08	52.80
IUUC-Eeu-035063	Erinaceus europaeus	39.34	2.00e-06	47.40
IUUC-Fca-036488	Felis catus	37.70	2.00e-06	47.80
IUUC-Fal-037501	Ficedula albicollis	33.33	4.00e-08	53.50
IUUC-Gmo-038614	Gadus morhua	35.29	2.00e-07	50.40
IUUC-Gga-040738	Gallus gallus	32.26	9.00e-08	52.00
IUUC-Gac-041381	Gasterosteus aculeatus	30.53	1.00e-09	58.20
IUUC-Gma-042964	Glycine max	59.57	6.00e-64	236.00
IUUC-Ggo-045139	Gorilla gorilla	37.70	2.00e-06	47.80
IUUC-Hsa-046083	Homo sapiens	37.70	2.00e-06	47.80
IUUC-Itr-048970	Ictidomys tridecemlineatus	37.70	5.00e-06	46.20
IUUC-Lch-050369	Latimeria chalumnae	30.84	2.00e-07	50.80
IUUC-Lpe-050727	Leersia perrieri	42.25	1.00e-35	143.00
IUUC-Loc-052347	Lepisosteus oculatus	31.18	4.00e-09	56.20
IUUC-Laf-053575	Loxodonta africana	39.34	1.00e-06	48.50
IUUC-Mcc-054823	Macaca mulatta	37.70	2.00e-06	47.80
IUUC-Meu-056878	Macropus eugenii	29.03	3.00e-04	39.70
IUUC-Mtr-057811	Medicago truncatula	57.69	4.00e-55	207.00
IUUC-Mla-058917	Melampsora laricipopulina	30.91	5.00e-03	35.00
IUUC-Mga-059445	Meleagris gallopavo	32.26	1.00e-07	52.00
IUUC-Mmr-060665	Microcebus murinus	37.70	2.00e-06	47.80
IUUC-Mdo-062430	Monodelphis domestica	34.41	6.00e-09	55.80
IUUC-Mmu-064173	Mus musculus	37.70	2.00e-06	48.10
IUUC-Mac-065364	Musa acuminata	48.83	4.00e-55	207.00
IUUC-Mpu-066344	Mustela putorius furo	33.82	3.00e-06	47.00
IUUC-Mlu-068101	Myotis lucifugus	37.70	2.00e-06	47.80
IUUC-Nfi-068489	Neosartorya fischeri	33.33	8.00e-04	37.70
IUUC-Opr-070498	Ochotona princeps	27.06	4.00e-04	39.30
IUUC-Ont-071579	Oreochromis niloticus	36.76	9.00e-09	55.10
IUUC-Oan-072862	Ornithorhynchus anatinus	32.26	3.00e-09	57.00
IUUC-Ocu-073882	Oryctolagus cuniculus	37.70	1.00e-06	47.80
IUUC-Oba-075710	Oryza barthii	38.22	2.00e-32	131.00
IUUC-Ogl-077171	Oryza glaberrima	43.81	4.00e-37	147.00
IUUC-Ogu-078827	Oryza glumaepatula	43.81	2.00e-36	145.00
IUUC-Oin-080204	Oryza indica	32.56	2.00e-32	132.00
IUUC-Olo-081049	Oryza longistaminata	36.82	5.00e-32	131.00
IUUC-Ome-081128	Oryza meridionalis	43.33	5.00e-26	109.00
IUUC-Oni-083077	Oryza nivara	37.82	2.00e-32	132.00
IUUC-Opu-083270	Oryza punctata	36.79	1.00e-30	126.00
IUUC-Oru-084299	Oryza rufipogon	43.33	5.00e-26	109.00
IUUC-Osa-085671	Oryza sativa	43.81	1.00e-24	103.00
IUUC-Ola-086456	Oryzias latipes	36.08	4.00e-10	59.70
IUUC-Oga-087918	Otolemur garnettii	37.70	2.00e-06	47.80
IUUC-Oar-089663	Ovis aries	32.26	2.00e-08	54.30
IUUC-Ptr-091033	Pan troglodytes	37.70	2.00e-06	47.80
IUUC-Pan-092277	Papio anubis	37.70	2.00e-06	47.80
IUUC-Psi-094086	Pelodiscus sinensis	32.26	1.00e-07	52.00
IUUC-Pma-094683	Petromyzon marinus	41.67	1.00e-07	50.40
IUUC-Pfo-097334	Poecilia formosa	33.33	1.00e-09	58.50
IUUC-Pab-098345	Pongo abelii	37.70	2.00e-06	47.80
IUUC-Pop-099683	Populus trichocarpa	56.35	2.00e-39	153.00
IUUC-Pca-100737	Procavia capensis	40.98	3.00e-07	50.40
IUUC-Pva-102497	Pteropus vampyrus	39.34	9.00e-07	48.90
IUUC-Pgr-103464	Puccinia graminis	29.41	2.00e-05	41.20
IUUC-Ptt-103914	Puccinia triticina	40.00	2.80e-01	29.60
IUUC-Rno-105177	Rattus norvegicus	37.70	1.00e-06	48.10
IUUC-Sce-106376	Saccharomyces cerevisiae	32.35	3.60e-02	32.30
IUUC-Sha-106480	Sarcophilus harrisii	34.41	3.00e-09	57.00
IUUC-Sja-107782	Schizosaccharomyces japonicus	24.70	9.00e-07	47.00
IUUC-Spo-108157	Schizosaccharomyces pombe	31.88	5.00e-05	40.40
IUUC-Sit-109960	Setaria italica	43.02	3.00e-35	141.00
IUUC-Sar-113255	Sorex araneus	39.34	1.00e-06	48.50
IUUC-Sbi-114855	Sorghum bicolor	43.66	3.00e-30	124.00
IUUC-Sre-115076	Sporisorium reilianum	28.24	5.00e-12	65.90
IUUC-Ssc-115875	Sus scrofa	32.26	2.00e-08	54.30
IUUC-Tgu-117066	Taeniopygia guttata	33.33	4.00e-08	53.10
IUUC-Tru-117881	Takifugu rubripes	38.89	5.00e-09	55.80
IUUC-Tsy-119531	Tarsius syrichta	30.68	2.00e-06	47.40
IUUC-Tni-120325	Tetraodon nigroviridis	32.82	2.00e-10	60.80
IUUC-Tae-122727	Triticum aestivum	36.91	7.00e-29	120.00
IUUC-Tur-126506	Triticum urartu	34.39	3.00e-26	111.00
IUUC-Tbe-127648	Tupaia belangeri	37.70	2.00e-06	47.80
IUUC-Ttr-129287	Tursiops truncatus	33.33	1.00e-08	55.10
IUUC-Uma-129543	Ustilago maydis	26.71	2.00e-08	54.30
IUUC-Vpa-130645	Vicugna pacos	32.26	2.00e-08	54.30
IUUC-Xtr-132709	Xenopus tropicalis	30.00	5.00e-08	52.80
IUUC-Xma-133858	Xiphophorus maculatus	35.05	8.00e-10	58.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence