iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007369

Ensembl Protein ID

AT4G22150.1

UniProt Accession

Q9SUG6; F4JL29; PUX3_ARATH

Genbank Protein ID

AAS78925.1; CAB52871.1; CAB79170.1; AEE84564.2; AAQ62441.1; BAD44004.1

Protein Name

Plant UBX domain-containing protein 3; CDC48-interacting UBX-domain protein 3

Genbank Nucleotide ID

AY572783; AL021712; AL161556; CP002687; BT010440; AK176241

Gene Name

PUX3; At4g22150; T10I14.3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G22150	AT4G22150.1	AT4G22150.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	1.20e-10	42.7	227	299

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 4    eqatlqiRlpdGkrlvrkFpssttleqiyqfveyllvessdpFeL.vspfPrrtlkpeehmstlqeagLvpsgsl 77
           +++ +q+Rl+dG r+v kF+  +t+++i+ f+e ++     +++L v +fP ++l++ ++  t+++agL++s ++
   Q: 227  PSTSIQLRLADGTRMVAKFNNHHTVNDIRGFIEFSRPGNPNNYTLqVMGFPPKPLTDPSQ--TIEQAGLASSVVI 299
           4899*****************************6667777778885799***********..*********9988 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSSKDKKLSK PTSGRTGGIR TLSDLNRRSE PDSDSDSDGP QEYFTGGEKS GMLVQDPTKE 60
PKHDDVDEIF NQARQLGAVE GPLEHPSSSR SFTGTGRLLS GESVPTALQQ PEPVIHNIIF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCGATTTCC TAATTCCTAA TCCGTTTCCT TTTTATTCCG ATCAAAGCAG CGAAAAAAGC 60
ATCGGAGATA TGTCGTCTAA GGACAAGAAA CTATCGAAGC CAACAAGTGG TCGTACTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR012989--SEP_domain
IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS51399--SEP
PS50033--UBX

Pfam

PF08059--SEP
PF00789--UBX

SMART

SM00553--SEP
SM00166--UBX

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0043130--F:ubiquitin binding
GO:0007030--P:Golgi organization
GO:0061025--P:membrane fusion
GO:0031468--P:nuclear envelope reassembly
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G22150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002543	Amborella trichopoda	63.40	2.00e-101	361.00
IUUC-Aly-006329	Arabidopsis lyrata	95.36	8.00e-160	555.00
IUUC-Afu-008919	Aspergillus fumigatus	33.46	6.00e-31	127.00
IUUC-Ang-009594	Aspergillus niger	30.04	8.00e-30	124.00
IUUC-Ate-010455	Aspergillus terreus	32.03	2.00e-29	122.00
IUUC-Bgr-012256	Blumeria graminis	30.26	1.00e-25	110.00
IUUC-Bci-013750	Botrytis cinerea	33.21	2.00e-28	119.00
IUUC-Bol-016465	Brassica oleracea	90.73	6.00e-148	515.00
IUUC-Bra-017055	Brassica rapa	91.00	4.00e-141	493.00
IUUC-Cin-025686	Ciona intestinalis	36.79	2.00e-35	142.00
IUUC-Csv-025945	Ciona savignyi	37.77	5.00e-36	144.00
IUUC-Fox-037690	Fusarium oxysporum	51.52	2.50e-02	30.80
IUUC-Fso-038190	Fusarium solani	33.83	3.00e-27	115.00
IUUC-Lch-050161	Latimeria chalumnae	32.27	1.00e-33	136.00
IUUC-Mor-057220	Magnaporthe oryzae	29.57	6.00e-25	107.00
IUUC-Mpo-057595	Magnaporthe poae	25.90	1.00e-10	60.10
IUUC-Nfi-068609	Neosartorya fischeri	33.46	2.00e-30	126.00
IUUC-Ncr-068786	Neurospora crassa	29.72	4.00e-20	92.00
IUUC-Obr-076164	Oryza brachyantha	54.75	1.00e-58	218.00
IUUC-Ola-086761	Oryzias latipes	33.93	2.00e-33	135.00
IUUC-Olu-087598	Ostreococcus lucimarinus	38.89	8.00e-46	176.00
IUUC-Pno-094769	Phaeosphaeria nodorum	32.17	1.00e-28	119.00
IUUC-Ppa-095833	Physcomitrella patens	52.92	2.00e-76	279.00
IUUC-Pgr-103447	Puccinia graminis	30.03	2.00e-29	122.00
IUUC-Ptt-103729	Puccinia triticina	30.37	3.00e-30	125.00
IUUC-Pte-104083	Pyrenophora teres	31.21	5.00e-31	128.00
IUUC-Sja-107717	Schizosaccharomyces japonicus	35.09	1.00e-29	123.00
IUUC-Spo-108358	Schizosaccharomyces pombe	34.45	6.00e-26	111.00
IUUC-Smo-109535	Selaginella moellendorffii	51.96	1.00e-70	259.00
IUUC-Sly-111203	Solanum lycopersicum	65.26	2.00e-98	350.00
IUUC-Stu-112828	Solanum tuberosum	65.91	3.00e-96	343.00
IUUC-Sar-113445	Sorex araneus	26.55	2.00e-16	79.00
IUUC-Sre-115176	Sporisorium reilianum	32.92	1.00e-30	127.00
IUUC-Tca-121311	Theobroma cacao	74.32	8.00e-111	392.00
IUUC-Tre-121941	Trichoderma reesei	31.50	4.00e-25	108.00
IUUC-Tvi-122602	Trichoderma virens	31.56	1.00e-22	99.80
IUUC-Uma-129600	Ustilago maydis	31.46	5.00e-31	128.00
IUUC-Vda-129743	Verticillium dahliae	31.37	3.00e-22	98.60
IUUC-Vvi-131338	Vitis vinifera	72.37	6.00e-112	396.00
IUUC-Xtr-132381	Xenopus tropicalis	36.70	3.00e-25	107.00
IUUC-Yli-134604	Yarrowia lipolytica	29.41	3.00e-21	95.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence