iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017988

Ensembl Protein ID

Bra020884.1-P

UniProt Accession

M4DWJ0; M4DWJ0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra020884	Bra020884.1	Bra020884.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DDB1	0	1643.6	736	1076

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DDB1

   S: 784  seleenevnfllvlDkntfelllaqdlrewEtavsllSqklkdDseeyyvvktalvlpeenelkkgrilvfsvedslklkLltvaekkvkgavi 877
            ++ee+e++f+++lD++ fe+l +++l+++E+++s+lS++++dD+++yy+v+t++vlpeene++kgrilvf ve++   kL+ vaek++kg+v+
   Q: 736  PSGEESEMHFVRLLDDRDFEFLATYPLDAFEYGCSILSCSFTDDKNVYYCVGTSYVLPEENEPTKGRILVFVVEEG---KLQLVAEKETKGSVY 826
           5789************************************************************************...*************** PP
   S: 878  dlvklNgkllaainseirlyewkvmgtdekelrkeCernntilaLtlktrkdfivVgDlmrsvtLllykdlegsfeEsardynlewmsaveiln 971
           +l+++Ngkllaain++i+ly+w +++++++el++eC+++++ilaL+++tr+dfivVgDlm+s++Ll+yk++eg++eE+ardyn+ wm+av il+
   Q: 827  SLNAFNGKLLAAINQKIQLYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGAIEEIARDYNASWMTAVGILD 920
           ********************************************************************************************** PP
   S: 972  ddiflgaencgNlfvvkkdikagltdeerslleevgefrlgefvevfrfgtlvlqdvgerevnrssevifgtengeigvilrlrrellkflrnl 1065
           dd++lga+nc+Nlf+vk+  ++++tdeer ++e+vge+++gefv++fr+g+lv++ + ++e+ +++++ifgt+ng+igv+++l++e+++fl++l
   Q: 921  DDTYLGADNCYNLFTVKRH-SEAATDEERCRMEVVGEYHIGEFVNRFRHGSLVMRLP-DSETSQIPTMIFGTVNGVIGVMASLPQEQYAFLEKL 1012
           *******************.***********************************98.************************************ PP
   S: 1066 estlkkvikrvakieHssyRsFetekrterasgfvdgdLiesilDlsrdkavdilkvl...yek 1126
           +++++kvik+v++++H+++RsF++ekr + a+ f+dgdLies++D+sr k+++i+k++    e+
   Q: 1013 QTSMRKVIKGVGGLSHEQWRSFKNEKRSADARSFLDGDLIESFMDMSRRKMEEISKEMdvqVEE 1076
           **********************************************************555222 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSVWNYVVTA QKPTSVTHSC VGNFTSPQEL NLIVAKCTRI EIHLLTPQGL QAILDVPLYG 60
RIATLELFRP HGETQDFLFI ATEGYKFCVL QWDSDSSELI TRAMGDVSDR IGRQTDNGQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGTAT GGAACTACGT CGTCACGGCT CAGAAACCCA CCTCTGTCAC TCACTCTTGC 60
GTCGGAAACT TCACCAGTCC CCAGGAGCTG AATCTCATCG TCGCGTACGT AACTCCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001041--2Fe-2S_ferredoxin-type
IPR012675--Beta-grasp_dom
IPR004871--Cleavage/polyA-sp_fac_asu_C
IPR031297--DDB1
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF03178--CPSF_A

Gene Ontology

GO:0005634--C:nucleus
GO:0009055--F:electron carrier activity
GO:0051536--F:iron-sulfur cluster binding
GO:0003676--F:nucleic acid binding
GO:0006281--P:DNA repair
GO:0009793--P:embryo development ending in seed dormancy

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008149	Aspergillus clavatus	30.46	1.00e-123	437.00
IUUC-Afl-008549	Aspergillus flavus	31.29	6.00e-127	448.00
IUUC-Afu-009076	Aspergillus fumigatus	30.46	2.00e-133	469.00
IUUC-Ani-009302	Aspergillus nidulans	28.23	3.00e-106	379.00
IUUC-Ang-009636	Aspergillus niger	29.45	2.00e-110	394.00
IUUC-Aor-010073	Aspergillus oryzae	31.52	5.00e-134	472.00
IUUC-Ate-010422	Aspergillus terreus	30.19	4.00e-129	456.00
IUUC-Bgr-012164	Blumeria graminis	28.98	3.00e-118	419.00
IUUC-Cre-022557	Chlamydomonas reinhardtii	48.42	0.00e+00	991.00
IUUC-Cgl-026595	Colletotrichum gloeosporioides	28.28	1.00e-116	414.00
IUUC-Dor-030789	Dipodomys ordii	46.33	2.00e-119	423.00
IUUC-Dse-031491	Dothistroma septosporum	29.57	8.00e-129	454.00
IUUC-Dme-031940	Drosophila melanogaster	46.52	0.00e+00	981.00
IUUC-Fox-037954	Fusarium oxysporum	28.04	1.00e-119	424.00
IUUC-Fso-038292	Fusarium solani	28.01	5.00e-119	422.00
IUUC-Ggr-039907	Gaeumannomyces graminis	26.62	3.00e-115	409.00
IUUC-Lma-053246	Leptosphaeria maculans	29.41	5.00e-126	445.00
IUUC-Meu-056808	Macropus eugenii	53.40	0.00e+00	783.00
IUUC-Mor-057253	Magnaporthe oryzae	27.62	7.00e-106	378.00
IUUC-Mpo-057562	Magnaporthe poae	26.68	2.00e-109	390.00
IUUC-Mla-059154	Melampsora laricipopulina	25.69	7.00e-92	332.00
IUUC-Nfi-068355	Neosartorya fischeri	30.61	6.00e-127	448.00
IUUC-Pgr-103659	Puccinia graminis	24.91	2.00e-70	260.00
IUUC-Ptt-103884	Puccinia triticina	23.28	8.00e-60	225.00
IUUC-Pte-104233	Pyrenophora teres	30.25	8.00e-137	481.00
IUUC-Pyt-104454	Pyrenophora triticirepentis	30.58	4.00e-133	469.00
IUUC-Sja-107864	Schizosaccharomyces japonicus	25.31	3.00e-90	326.00
IUUC-Spo-108029	Schizosaccharomyces pombe	27.09	6.00e-119	422.00
IUUC-Sar-113606	Sorex araneus	52.07	2.00e-68	254.00
IUUC-Sre-114936	Sporisorium reilianum	25.33	8.00e-70	259.00
IUUC-Tsy-119513	Tarsius syrichta	50.32	6.00e-178	617.00
IUUC-Tre-122136	Trichoderma reesei	27.56	7.00e-115	408.00
IUUC-Tvi-122512	Trichoderma virens	27.54	4.00e-119	422.00
IUUC-Uma-129583	Ustilago maydis	27.14	4.00e-71	263.00
IUUC-Vda-129870	Verticillium dahliae	26.56	2.00e-107	383.00
IUUC-Vpa-130117	Vicugna pacos	48.98	0.00e+00	885.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence