iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095263

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544931

Gene Name

PHYPADRAFT_73603

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S42_244V6	PP1S42_244V6.1	PP1S42_244V6.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.84	3.00e-25	110.00	IUUC-Sce-106260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDLFPVRNAF NRASKKQKTW YGKTQEDIDK ARLKEIGAQS FTEAPLKEIN NAMTKCGKLI 60
DKCFNRNLGK VYRNVEFNHG LVNQLVALHF YRQGLFDVGD CFVAESHGES ALSMRTQFWE 120

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Nucleotide Sequence
(Fasta)

ATGGACTTAT TTCCTGTGAG AAATGCATTC AATCGGGCTT CAAAGAAACA AAAGACATGG 60
TATGGCAAGA CTCAAGAAGA TATTGATAAG GTTTTGGAAG TCATAACCAA TGCAATTATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR013144--CRA_dom
IPR024964--CTLH/CRA
IPR006595--CTLH_C
IPR006594--LisH
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50897--CTLH
PS50896--LISH
PS50089--ZF_RING_2

Pfam

PF10607--CLTH
PF13445--zf-RING_UBOX

SMART

SM00757--CRA
SM00668--CTLH
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0034657--C:GID complex
GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_73603

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007826	Ashbya gossypii	30.13	3.00e-20	92.00
IUUC-Bgr-012198	Blumeria graminis	34.91	4.00e-53	201.00
IUUC-Cin-025509	Ciona intestinalis	35.05	1.00e-53	202.00
IUUC-Cne-026984	Cryptococcus neoformans	29.05	3.00e-26	111.00
IUUC-Dse-031216	Dothistroma septosporum	34.59	1.00e-50	192.00
IUUC-Dme-032053	Drosophila melanogaster	35.48	1.00e-52	200.00
IUUC-Eeu-034990	Erinaceus europaeus	48.39	4.00e-04	38.50
IUUC-Fox-037791	Fusarium oxysporum	32.80	2.00e-52	199.00
IUUC-Mvi-060298	Microbotryum violaceum	31.89	6.00e-32	131.00
IUUC-Sce-106260	Saccharomyces cerevisiae	29.84	8.00e-26	110.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence