iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135863

Ensembl Protein ID

Zm00001d022417_T003

UniProt Accession

A0A1D6IMF4; A0A1D6IMF4_MAIZE

Genbank Protein ID

ONM60466.1; ONM60484.1

Protein Name

DNA binding

Genbank Nucleotide ID

CM007650; CM007650

Gene Name

ZEAMMB73_Zm00001d022417

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d022417	Zm00001d022417_T010	Zm00001d022417_T010
Zm00001d022417	Zm00001d022417_T002	Zm00001d022417_T002
Zm00001d022417	Zm00001d022417_T003	Zm00001d022417_T003
Zm00001d022417	Zm00001d022417_T006	Zm00001d022417_T006
Zm00001d022417	Zm00001d022417_T015	Zm00001d022417_T015
Zm00001d022417	Zm00001d022417_T012	Zm00001d022417_T012
Zm00001d022417	Zm00001d022417_T017	Zm00001d022417_T017
Zm00001d022417	Zm00001d022417_T019	Zm00001d022417_T019
Zm00001d022417	Zm00001d022417_T014	Zm00001d022417_T014
Zm00001d022417	Zm00001d022417_T013	Zm00001d022417_T013

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.70e-09	37.4	423	465

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkC 51
            C +Cg  g+    l++C+ C  +fH +C++   e+ lp+ + w+Cp+C
   Q: 423  ECYLCGMDGN----LLCCDGCPAAFHSKCVGVV-EDLLPEGD-WYCPEC 465
           6999*99999....******************9.*******7.****** PP

Organism

Zea mays

Protein Sequence
(Fasta)

MEALVGRAVR KAFPGFGTYA GVVESYDPGA GYFRVLYEDG DSEEVDADEM AQILVGPAMP 60
RAQQQRTSPQ DAAGRRPKKR RRGNEDDPSP TSTPDGVVLA VAAAAGEETE PATPVMEAVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGTTTTCCC TCCCAAATTC CATTCCCCTT CTGCAGAGGA CTTGGCTAGC GAGTACTAAC 60
CGAAAGGATT TGGCGAGTAT AGTAGCAACT CACAACGCCT CGTCCCCCTG CACGGCCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002974	Amborella trichopoda	36.25	0.00e+00	714.00
IUUC-Acl-008313	Aspergillus clavatus	52.08	6.00e-10	59.30
IUUC-Ang-009553	Aspergillus niger	50.00	2.00e-11	63.90
IUUC-Aor-010143	Aspergillus oryzae	50.00	4.00e-10	59.70
IUUC-Ate-010574	Aspergillus terreus	48.15	2.00e-09	57.80
IUUC-Bgr-012025	Blumeria graminis	43.33	3.00e-09	57.40
IUUC-Bci-013636	Botrytis cinerea	35.51	3.00e-10	60.80
IUUC-Bdi-014165	Brachypodium distachyon	61.08	0.00e+00	1846.00
IUUC-Bol-015269	Brassica oleracea	32.89	2.00e-104	373.00
IUUC-Bra-018092	Brassica rapa	31.66	4.00e-105	376.00
IUUC-Cho-024758	Choloepus hoffmanni	25.00	7.00e-18	87.40
IUUC-Cin-025146	Ciona intestinalis	48.00	5.00e-10	60.10
IUUC-Cne-026966	Cryptococcus neoformans	40.82	6.00e-06	45.10
IUUC-Dse-031258	Dothistroma septosporum	37.04	8.00e-08	52.80
IUUC-Dme-032140	Drosophila melanogaster	27.96	1.00e-22	102.00
IUUC-Fox-038014	Fusarium oxysporum	38.00	2.00e-12	68.60
IUUC-Fso-038262	Fusarium solani	42.71	2.00e-13	71.20
IUUC-Hvu-047760	Hordeum vulgare	58.75	0.00e+00	1694.00
IUUC-Lpe-051272	Leersia perrieri	57.79	0.00e+00	1600.00
IUUC-Mtr-058758	Medicago truncatula	36.44	0.00e+00	715.00
IUUC-Oba-075584	Oryza barthii	58.55	0.00e+00	1592.00
IUUC-Obr-076085	Oryza brachyantha	60.07	0.00e+00	1629.00
IUUC-Ogl-077125	Oryza glaberrima	58.80	0.00e+00	1597.00
IUUC-Ogu-078256	Oryza glumaepatula	57.06	0.00e+00	1669.00
IUUC-Oin-079426	Oryza indica	58.65	0.00e+00	1633.00
IUUC-Olo-080881	Oryza longistaminata	60.46	0.00e+00	1603.00
IUUC-Ome-081742	Oryza meridionalis	59.63	0.00e+00	1654.00
IUUC-Oni-082756	Oryza nivara	58.80	0.00e+00	1635.00
IUUC-Opu-083742	Oryza punctata	59.50	0.00e+00	1681.00
IUUC-Oru-085016	Oryza rufipogon	58.69	0.00e+00	1629.00
IUUC-Pma-094355	Petromyzon marinus	28.94	1.00e-21	100.00
IUUC-Pfo-096749	Poecilia formosa	26.23	5.00e-20	94.40
IUUC-Ppe-101582	Prunus persica	38.35	0.00e+00	723.00
IUUC-Sja-107964	Schizosaccharomyces japonicus	33.72	2.00e-10	60.10
IUUC-Spo-108017	Schizosaccharomyces pombe	45.83	3.00e-08	53.10
IUUC-Sit-110833	Setaria italica	75.54	0.00e+00	2313.00
IUUC-Sbi-114222	Sorghum bicolor	84.42	0.00e+00	2672.00
IUUC-Tre-121959	Trichoderma reesei	38.24	3.00e-12	67.40
IUUC-Tvi-122553	Trichoderma virens	40.82	2.00e-12	67.80
IUUC-Tae-125366	Triticum aestivum	54.00	0.00e+00	1646.00
IUUC-Vvi-131129	Vitis vinifera	36.33	2.00e-137	484.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence