iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057752

Ensembl Protein ID

KEH20606

UniProt Accession

A0A072TTT6; A0A072TTT6_MEDTR

Genbank Protein ID

KEH20606.1

Protein Name

Glutamate-rich WD repeat protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g080700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g080700	KEH20606	KEH20606

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-26	93.1	268	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvl 35
           gHtdsv +l++ ++  + ++s+s D++i +WD+r g++
   Q: 268  GHTDSVEDLQWsPTepHVFASCSVDKSIAIWDTRLGRS 305
           8***********5555669*************987766 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTRGIKHRQK AKSKNKKRSE SSSAAAPPQV PVKVWQPGVD KLEEDEELQC DPSAYNSLHA 60
FHIGWPCLSF DILRDTMGLV RTEFPHTVYF ITGTQAEKPS WNSIGIFKVS NISGKRREPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAAACCCC TAAAACGTAA AAACCCTACA ATCTGCGTAA CCTAGTTCTT TCTCTTCTCT 60
CTCACCAACA ACAAGCCACT CACAGGTTTG TCAAAGGTTC AATCTGTTAA GCTTAGATTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

mtr:MTR_8g080700

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	62.93	3.00e-149	521.00
IUUC-Aml-002309	Ailuropoda melanoleuca	43.15	2.00e-85	308.00
IUUC-Atr-002461	Amborella trichopoda	64.48	2.00e-156	545.00
IUUC-Aca-004760	Anolis carolinensis	43.78	2.00e-82	298.00
IUUC-Aly-005405	Arabidopsis lyrata	71.17	5.00e-179	619.00
IUUC-Ath-007178	Arabidopsis thaliana	70.65	0.00e+00	633.00
IUUC-Ago-007735	Ashbya gossypii	37.05	2.00e-66	246.00
IUUC-Acl-008294	Aspergillus clavatus	37.17	1.00e-71	263.00
IUUC-Afl-008486	Aspergillus flavus	37.61	2.00e-73	268.00
IUUC-Afu-009019	Aspergillus fumigatus	37.83	7.00e-73	267.00
IUUC-Ani-009465	Aspergillus nidulans	38.55	2.00e-72	266.00
IUUC-Ang-009641	Aspergillus niger	37.16	2.00e-69	255.00
IUUC-Ate-010426	Aspergillus terreus	37.39	1.00e-73	269.00
IUUC-Ame-010856	Astyanax mexicanus	42.66	2.00e-86	312.00
IUUC-Bgr-012258	Blumeria graminis	38.64	2.00e-58	219.00
IUUC-Bta-012437	Bos taurus	41.36	2.00e-84	305.00
IUUC-Bci-013647	Botrytis cinerea	40.55	4.00e-72	264.00
IUUC-Bdi-014728	Brachypodium distachyon	66.59	3.00e-166	577.00
IUUC-Bol-015126	Brassica oleracea	69.08	5.00e-178	616.00
IUUC-Bra-017677	Brassica rapa	76.62	2.00e-82	298.00
IUUC-Cel-018454	Caenorhabditis elegans	39.86	1.00e-84	306.00
IUUC-Cja-018859	Callithrix jacchus	40.92	3.00e-86	311.00
IUUC-Cfa-020912	Canis familiaris	42.82	2.00e-84	305.00
IUUC-Cpo-021368	Cavia porcellus	40.52	8.00e-87	313.00
IUUC-Csa-023599	Chlorocebus sabaeus	43.15	6.00e-87	313.00
IUUC-Cin-025718	Ciona intestinalis	42.36	5.00e-89	320.00
IUUC-Csv-025806	Ciona savignyi	47.39	9.00e-73	266.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	35.08	4.00e-58	218.00
IUUC-Cne-026781	Cryptococcus neoformans	37.91	2.00e-79	289.00
IUUC-Cme-027129	Cyanidioschyzon merolae	36.62	2.00e-49	189.00
IUUC-Dre-028225	Danio rerio	42.62	2.00e-87	315.00
IUUC-Dno-029792	Dasypus novemcinctus	42.19	3.00e-83	301.00
IUUC-Dor-030773	Dipodomys ordii	39.19	5.00e-39	154.00
IUUC-Dse-031289	Dothistroma septosporum	38.04	2.00e-69	255.00
IUUC-Dme-031676	Drosophila melanogaster	41.86	1.00e-88	319.00
IUUC-Eca-033618	Equus caballus	43.15	4.00e-85	307.00
IUUC-Fca-036102	Felis catus	42.64	3.00e-85	308.00
IUUC-Fox-037899	Fusarium oxysporum	38.02	5.00e-69	254.00
IUUC-Fso-038130	Fusarium solani	37.79	2.00e-69	256.00
IUUC-Gmo-038741	Gadus morhua	42.89	3.00e-84	304.00
IUUC-Ggr-040086	Gaeumannomyces graminis	35.01	7.00e-67	247.00
IUUC-Gac-042243	Gasterosteus aculeatus	42.86	3.00e-87	315.00
IUUC-Gma-044177	Glycine max	82.24	0.00e+00	734.00
IUUC-Ggo-044564	Gorilla gorilla	41.00	1.00e-85	309.00
IUUC-Hsa-046021	Homo sapiens	41.87	6.00e-86	310.00
IUUC-Hvu-047721	Hordeum vulgare	65.02	8.00e-158	549.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	40.35	8.00e-84	303.00
IUUC-Kpa-049271	Komagataella pastoris	37.15	3.00e-69	255.00
IUUC-Lch-049974	Latimeria chalumnae	40.73	5.00e-84	304.00
IUUC-Lpe-051388	Leersia perrieri	62.36	2.00e-144	504.00
IUUC-Lma-053010	Leptosphaeria maculans	37.87	3.00e-70	258.00
IUUC-Laf-054058	Loxodonta africana	42.30	3.00e-87	315.00
IUUC-Mcc-055246	Macaca mulatta	43.37	3.00e-88	318.00
IUUC-Meu-056795	Macropus eugenii	41.24	2.00e-82	298.00
IUUC-Mor-057175	Magnaporthe oryzae	36.59	3.00e-68	251.00
IUUC-Mpo-057388	Magnaporthe poae	34.64	3.00e-53	201.00
IUUC-Mla-058904	Melampsora laricipopulina	39.01	1.00e-71	263.00
IUUC-Mvi-060525	Microbotryum violaceum	39.60	6.00e-73	267.00
IUUC-Mmr-060905	Microcebus murinus	42.08	2.00e-86	311.00
IUUC-Mmu-063428	Mus musculus	43.32	1.00e-85	309.00
IUUC-Mac-065276	Musa acuminata	71.00	1.00e-172	598.00
IUUC-Mpu-066062	Mustela putorius furo	41.65	2.00e-85	308.00
IUUC-Mlu-068115	Myotis lucifugus	50.22	2.00e-55	207.00
IUUC-Nfi-068512	Neosartorya fischeri	37.83	7.00e-71	260.00
IUUC-Ncr-068629	Neurospora crassa	37.62	1.00e-66	246.00
IUUC-Nle-070016	Nomascus leucogenys	42.61	5.00e-84	304.00
IUUC-Ont-072230	Oreochromis niloticus	42.52	2.00e-86	311.00
IUUC-Oan-072759	Ornithorhynchus anatinus	30.30	1.00e-52	199.00
IUUC-Ocu-074511	Oryctolagus cuniculus	41.89	5.00e-86	310.00
IUUC-Oba-075093	Oryza barthii	63.18	2.00e-152	531.00
IUUC-Obr-076130	Oryza brachyantha	64.32	1.00e-165	575.00
IUUC-Ogl-077397	Oryza glaberrima	66.36	5.00e-165	573.00
IUUC-Ogu-078111	Oryza glumaepatula	64.63	3.00e-144	505.00
IUUC-Oin-079162	Oryza indica	64.55	3.00e-157	547.00
IUUC-Olo-080909	Oryza longistaminata	55.36	2.00e-143	501.00
IUUC-Ome-081768	Oryza meridionalis	64.63	3.00e-146	511.00
IUUC-Oni-082453	Oryza nivara	64.67	2.00e-156	545.00
IUUC-Opu-084133	Oryza punctata	63.82	2.00e-137	482.00
IUUC-Oru-085056	Oryza rufipogon	61.98	2.00e-126	444.00
IUUC-Osa-085735	Oryza sativa	66.36	4.00e-165	573.00
IUUC-Ola-087066	Oryzias latipes	42.09	1.00e-82	299.00
IUUC-Olu-087594	Ostreococcus lucimarinus	46.91	2.00e-105	375.00
IUUC-Oga-087974	Otolemur garnettii	41.87	2.00e-86	312.00
IUUC-Oar-089902	Ovis aries	41.43	2.00e-84	305.00
IUUC-Ptr-090469	Pan troglodytes	38.56	3.00e-80	291.00
IUUC-Pan-092858	Papio anubis	43.15	5.00e-87	314.00
IUUC-Psi-094092	Pelodiscus sinensis	38.54	2.00e-41	162.00
IUUC-Pno-094919	Phaeosphaeria nodorum	37.10	5.00e-65	241.00
IUUC-Ppa-095849	Physcomitrella patens	54.68	1.00e-139	488.00
IUUC-Pfo-096535	Poecilia formosa	44.01	5.00e-87	314.00
IUUC-Pab-098478	Pongo abelii	41.87	2.00e-86	312.00
IUUC-Pop-098902	Populus trichocarpa	75.64	0.00e+00	644.00
IUUC-Pca-100403	Procavia capensis	46.32	9.00e-66	242.00
IUUC-Ppe-101997	Prunus persica	81.26	0.00e+00	692.00
IUUC-Pva-102423	Pteropus vampyrus	42.30	7.00e-88	317.00
IUUC-Pgr-103339	Puccinia graminis	40.35	6.00e-80	291.00
IUUC-Ptt-103937	Puccinia triticina	39.78	2.00e-78	286.00
IUUC-Pte-104051	Pyrenophora teres	37.87	1.00e-67	249.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	38.78	2.00e-69	256.00
IUUC-Rno-106118	Rattus norvegicus	43.34	2.00e-83	302.00
IUUC-Sce-106330	Saccharomyces cerevisiae	35.92	3.00e-63	235.00
IUUC-Sha-106564	Sarcophilus harrisii	38.79	2.00e-67	248.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	40.23	2.00e-78	285.00
IUUC-Spo-108351	Schizosaccharomyces pombe	40.84	1.00e-82	300.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	40.55	1.00e-73	270.00
IUUC-Smo-109619	Selaginella moellendorffii	55.88	4.00e-132	464.00
IUUC-Sit-109857	Setaria italica	66.97	1.00e-163	568.00
IUUC-Sly-111245	Solanum lycopersicum	67.15	2.00e-171	594.00
IUUC-Stu-112645	Solanum tuberosum	70.97	0.00e+00	640.00
IUUC-Sar-113342	Sorex araneus	43.49	4.00e-79	287.00
IUUC-Sbi-114359	Sorghum bicolor	67.43	3.00e-165	573.00
IUUC-Sre-115098	Sporisorium reilianum	39.61	1.00e-77	283.00
IUUC-Ssc-115496	Sus scrofa	41.65	4.00e-86	311.00
IUUC-Tru-117662	Takifugu rubripes	43.22	2.00e-86	312.00
IUUC-Tni-120564	Tetraodon nigroviridis	40.71	9.00e-70	256.00
IUUC-Tca-121710	Theobroma cacao	76.63	0.00e+00	673.00
IUUC-Tre-122239	Trichoderma reesei	38.71	4.00e-73	268.00
IUUC-Tvi-122589	Trichoderma virens	38.25	5.00e-73	267.00
IUUC-Tae-125574	Triticum aestivum	67.28	6.00e-166	576.00
IUUC-Tur-126135	Triticum urartu	62.99	7.00e-123	433.00
IUUC-Tme-127073	Tuber melanosporum	36.38	2.00e-66	246.00
IUUC-Ttr-128383	Tursiops truncatus	41.00	5.00e-83	300.00
IUUC-Uma-129345	Ustilago maydis	39.96	7.00e-80	290.00
IUUC-Vda-129893	Verticillium dahliae	38.02	1.00e-69	256.00
IUUC-Vvi-131067	Vitis vinifera	81.12	0.00e+00	694.00
IUUC-Xtr-132603	Xenopus tropicalis	44.06	3.00e-93	335.00
IUUC-Xma-133149	Xiphophorus maculatus	43.26	3.00e-86	311.00
IUUC-Yli-134459	Yarrowia lipolytica	39.07	2.00e-68	252.00
IUUC-Zma-135548	Zea mays	67.12	3.00e-162	564.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence