iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d040218	Zm00001d040218_T018	Zm00001d040218_T018
Zm00001d040218	Zm00001d040218_T005	Zm00001d040218_T005
Zm00001d040218	Zm00001d040218_T016	Zm00001d040218_T016
Zm00001d040218	Zm00001d040218_T033	Zm00001d040218_T033
Zm00001d040218	Zm00001d040218_T010	Zm00001d040218_T010
Zm00001d040218	Zm00001d040218_T032	Zm00001d040218_T032
Zm00001d040218	Zm00001d040218_T019	Zm00001d040218_T019
Zm00001d040218	Zm00001d040218_T035	Zm00001d040218_T035

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	33.00	5.00e-05	47.40	IUUC-Hsa-046580

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Zea mays

Protein Sequence
(Fasta)

MAAPKPIWVR QAEEAKLKSE AETAAAAKAA FDATFKALAA ASGDDYNDVD PAPPSPAELT 60
STDSDDDAPA LPGPVDPSKC SAAGPGIAGG SAGTPSTFTV VAKDRHSRRL TAGGARVHVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTTGCTT GGTTGCCCCA TCCGACACGC CTCCTCTTCC TCGTTGCCCC TCGGCCCTCA 60
TCCCCTGCAT CTGCTCCCCC TCTAGGCCTC TACCGAACCC TAGCCGGCCA GCTGAGCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017868--Filamin/ABP280_repeat-like
IPR001298--Filamin/ABP280_rpt
IPR013783--Ig-like_fold
IPR014756--Ig_E-set
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR000571--Znf_CCCH

PROSITE

PS50194--FILAMIN_REPEAT
PS50102--RRM
PS50103--ZF_C3H1

Pfam

PF00630--Filamin
PF00076--RRM_1

SMART

SM00557--IG_FLMN
SM00360--RRM

Gene Ontology

GO:0046872--F:metal ion binding
GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002020	Ailuropoda melanoleuca	33.00	9.00e-08	51.60
IUUC-Aca-004825	Anolis carolinensis	28.87	1.00e-06	47.80
IUUC-Ame-010865	Astyanax mexicanus	38.24	1.00e-09	57.40
IUUC-Bgr-011976	Blumeria graminis	28.85	1.20e+00	27.30
IUUC-Bta-012744	Bos taurus	35.00	9.00e-09	54.70
IUUC-Cja-019162	Callithrix jacchus	32.00	1.00e-07	51.20
IUUC-Cfa-020163	Canis familiaris	34.00	4.00e-08	52.80
IUUC-Csa-023746	Chlorocebus sabaeus	32.00	1.00e-07	50.80
IUUC-Dre-028598	Danio rerio	38.78	2.00e-11	63.50
IUUC-Dno-029616	Dasypus novemcinctus	36.00	7.00e-10	58.50
IUUC-Dor-030216	Dipodomys ordii	32.61	3.00e-06	45.80
IUUC-Ete-032434	Echinops telfairi	31.00	3.00e-06	46.60
IUUC-Eca-034410	Equus caballus	34.00	3.00e-09	56.60
IUUC-Eeu-034954	Erinaceus europaeus	34.00	2.00e-08	53.90
IUUC-Fca-035410	Felis catus	31.86	6.00e-09	55.50
IUUC-Gmo-039232	Gadus morhua	35.58	4.00e-06	45.80
IUUC-Gac-042350	Gasterosteus aculeatus	40.40	5.00e-10	58.90
IUUC-Gma-044219	Glycine max	65.61	3.00e-102	366.00
IUUC-Ggo-045080	Gorilla gorilla	29.20	9.00e-08	51.60
IUUC-Hsa-046580	Homo sapiens	30.97	2.00e-08	53.90
IUUC-Itr-048145	Ictidomys tridecemlineatus	36.00	7.00e-10	58.50
IUUC-Lch-049464	Latimeria chalumnae	33.65	7.00e-09	55.10
IUUC-Lpe-050809	Leersia perrieri	71.56	2.00e-115	409.00
IUUC-Loc-052772	Lepisosteus oculatus	30.97	5.00e-09	55.80
IUUC-Mcc-055349	Macaca mulatta	35.00	5.00e-06	45.80
IUUC-Meu-056674	Macropus eugenii	32.32	8.00e-10	58.20
IUUC-Mmr-061225	Microcebus murinus	32.65	5.00e-08	52.40
IUUC-Mdo-062597	Monodelphis domestica	30.61	2.00e-08	53.90
IUUC-Mmu-063099	Mus musculus	35.00	1.00e-09	58.20
IUUC-Mac-065515	Musa acuminata	62.24	1.00e-95	344.00
IUUC-Mlu-067034	Myotis lucifugus	30.09	7.00e-08	51.60
IUUC-Nle-069855	Nomascus leucogenys	32.00	4.00e-08	52.40
IUUC-Opr-070954	Ochotona princeps	34.00	1.00e-08	54.30
IUUC-Ont-071292	Oreochromis niloticus	38.78	3.00e-07	49.70
IUUC-Ogl-077726	Oryza glaberrima	73.96	1.00e-124	440.00
IUUC-Ogu-078410	Oryza glumaepatula	73.96	1.00e-124	440.00
IUUC-Oni-083081	Oryza nivara	73.50	4.00e-123	435.00
IUUC-Oru-084365	Oryza rufipogon	73.50	6.00e-123	434.00
IUUC-Osa-085953	Oryza sativa	73.73	3.00e-124	439.00
IUUC-Oga-087909	Otolemur garnettii	31.58	5.00e-07	49.30
IUUC-Oar-089619	Ovis aries	35.00	6.00e-09	55.50
IUUC-Ptr-090712	Pan troglodytes	30.09	4.00e-08	52.40
IUUC-Pan-092806	Papio anubis	32.00	1.00e-07	50.80
IUUC-Psi-093414	Pelodiscus sinensis	30.39	1.00e-08	53.90
IUUC-Pma-094227	Petromyzon marinus	32.41	3.00e-05	42.70
IUUC-Pfo-096848	Poecilia formosa	38.38	4.00e-10	59.30
IUUC-Pab-098353	Pongo abelii	31.00	7.00e-08	52.00
IUUC-Pca-100183	Procavia capensis	34.00	5.00e-09	55.50
IUUC-Pva-102140	Pteropus vampyrus	33.00	7.00e-08	52.00
IUUC-Rno-105886	Rattus norvegicus	35.00	1.00e-09	57.40
IUUC-Sha-107458	Sarcophilus harrisii	31.31	3.00e-07	49.70
IUUC-Sly-111723	Solanum lycopersicum	63.48	2.00e-85	309.00
IUUC-Stu-112510	Solanum tuberosum	69.52	2.00e-32	131.00
IUUC-Sbi-114481	Sorghum bicolor	92.57	7.00e-126	444.00
IUUC-Ssc-116231	Sus scrofa	32.00	4.00e-08	52.80
IUUC-Tgu-116859	Taeniopygia guttata	36.27	1.00e-09	57.40
IUUC-Tru-118209	Takifugu rubripes	34.95	7.00e-09	55.10
IUUC-Tsy-119487	Tarsius syrichta	32.26	6.00e-06	45.80
IUUC-Tni-120290	Tetraodon nigroviridis	37.74	1.00e-10	60.80
IUUC-Tbe-128111	Tupaia belangeri	33.72	1.00e-06	47.40
IUUC-Ttr-128584	Tursiops truncatus	30.28	8.00e-06	45.10
IUUC-Vvi-131620	Vitis vinifera	69.52	2.00e-25	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence