iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114315

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G344400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g038810	Sb03g038810.1	Sb03g038810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.10e-08	34.8	127	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f++g  ++ lp CgH fh +C+ +w       + + +CPlCr
   Q: 127  CSICLGEFQEGdkVKALPrCGHGFHPECVDAW------LRARPSCPLCR 169
           ********55544888999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAQEALRWR YGDVDDGNFE VRGRGVPAVL VALFGVLVCF VAVCLYLRWT CHRYNDRRLI 60
AAARATAPPW YSSAATLAAG ATTACFPEAA GLDDAAIAGL AVTLYRPGAV GAGACAADDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGCGC AGGAGGCGCT TCGGTGGCGG TACGGCGACG TGGACGACGG CAACTTCGAG 60
GTGCGCGGCC GCGGCGTGCC GGCGGTCCTC GTGGCGCTCT TCGGCGTCCT CGTCTGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g038810

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002564	Amborella trichopoda	41.67	1.00e-21	95.10
IUUC-Bdi-014573	Brachypodium distachyon	73.85	4.00e-21	93.20
IUUC-Gma-043502	Glycine max	36.00	1.00e-20	91.70
IUUC-Lpe-051629	Leersia perrieri	50.82	6.00e-36	142.00
IUUC-Mtr-058498	Medicago truncatula	33.53	2.00e-18	84.30
IUUC-Mac-064429	Musa acuminata	33.70	1.00e-20	91.70
IUUC-Oba-075191	Oryza barthii	59.78	2.00e-30	124.00
IUUC-Obr-076860	Oryza brachyantha	54.05	5.00e-33	132.00
IUUC-Ogl-077584	Oryza glaberrima	59.78	2.00e-30	124.00
IUUC-Ogu-078773	Oryza glumaepatula	59.78	2.00e-30	124.00
IUUC-Oin-080112	Oryza indica	60.75	1.00e-29	122.00
IUUC-Olo-080647	Oryza longistaminata	58.12	3.00e-29	120.00
IUUC-Ome-081611	Oryza meridionalis	59.78	4.00e-30	123.00
IUUC-Oni-082108	Oryza nivara	60.75	1.00e-29	121.00
IUUC-Opu-083607	Oryza punctata	50.77	2.00e-36	144.00
IUUC-Oru-084593	Oryza rufipogon	59.78	2.00e-30	124.00
IUUC-Osa-086279	Oryza sativa	59.78	2.00e-30	124.00
IUUC-Sit-110425	Setaria italica	67.72	2.00e-58	217.00
IUUC-Tca-121482	Theobroma cacao	35.47	4.00e-20	90.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence