iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109105

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377620

Gene Name

SELMODRAFT_234083

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_234083	EFJ16022	EFJ16022

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-23	80.6	137	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+ ++t++++  ++++l+s+s D+++++WD+++g++++
   Q: 137  GHSKEITDFDWslNNKYLCSSSLDKSVRIWDTSEGHCIR 175
           8***********877********************9986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MRRLLLHRQA MDGKLSRQNW DCNGTGYVAY RKYICDVKPS VDHSEWAPSE GRLSKDLSKS 60
PASISSRRSS SVQADESEQP AYAFAGMKCL FDSCKASVNI VRFGNLSSDL LAFGAADGTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGAAGAT TGCTGCTCCA CAGGCAAGCG ATGGATGGGA AGCTCTCGCG CCAGGTAAAT 60
TTCTTTCTTT CTTGTCTGGC GCCTGCATTT GCGCCTTCTC TCTGTCTAGA ACTGGGATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_234083

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014322	Brachypodium distachyon	53.38	8.00e-118	416.00
IUUC-Eca-033362	Equus caballus	36.86	1.00e-36	146.00
IUUC-Gga-040458	Gallus gallus	38.31	4.00e-23	99.80
IUUC-Oba-075666	Oryza barthii	53.86	6.00e-120	423.00
IUUC-Ogl-076998	Oryza glaberrima	53.86	5.00e-120	423.00
IUUC-Ogu-078287	Oryza glumaepatula	54.11	1.00e-120	426.00
IUUC-Oin-079359	Oryza indica	53.86	7.00e-120	423.00
IUUC-Ome-081328	Oryza meridionalis	54.11	3.00e-124	437.00
IUUC-Oni-082574	Oryza nivara	53.86	6.00e-120	423.00
IUUC-Oru-085162	Oryza rufipogon	53.51	2.00e-118	418.00
IUUC-Osa-085507	Oryza sativa	53.51	2.00e-118	418.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence