iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114411

Ensembl Protein ID

Sb03g029780.1

UniProt Accession

A0A1B6Q508; A0A1B6Q508_SORBI

Genbank Protein ID

KXG33009.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G240700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g029780	Sb03g029780.1	Sb03g029780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-10	41.5	349	387

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sd.tllvsGsdDgtikvWDlrtgvl 35
           H ++v ++++     + + l++ + D+t+ +WD+ t++ 
   Q: 349  HDGGVVAVELsrvmGSaPQLITIGADKTLAIWDTVTFKE 387
           78888888888888445899*************999876 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAVENRPTSP FVLLILLFSS PPFSPLQLQV PTQISPTCHH HPRRQPCTAS LLPPLCSSPD 60
LQTPDLCSGP RPPLARDNPA AARGGRGEML RLRAFRPTSD KVVKIQLHPT HPWLVTADAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTCG AAAACAGGCC TACTAGCCCA TTCGTCCTGC TCATCTTGCT CTTCTCTTCG 60
CCTCCTTTCT CACCGTTGCA GTTGCAGGTT CCGACTCAGA TCTCCCCGAC CTGCCACCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	93.58	0.00e+00	1099.00
IUUC-Atr-002897	Amborella trichopoda	76.57	0.00e+00	1295.00
IUUC-Aly-006154	Arabidopsis lyrata	77.02	0.00e+00	1315.00
IUUC-Ath-007285	Arabidopsis thaliana	77.56	0.00e+00	1323.00
IUUC-Bdi-014824	Brachypodium distachyon	94.25	0.00e+00	1548.00
IUUC-Bol-015400	Brassica oleracea	77.32	0.00e+00	1338.00
IUUC-Bra-017475	Brassica rapa	75.92	0.00e+00	1341.00
IUUC-Gma-043699	Glycine max	78.45	0.00e+00	1342.00
IUUC-Hvu-047404	Hordeum vulgare	92.55	1.00e-153	534.00
IUUC-Mtr-058798	Medicago truncatula	77.69	0.00e+00	1363.00
IUUC-Mac-065076	Musa acuminata	83.85	0.00e+00	1435.00
IUUC-Oba-075727	Oryza barthii	95.71	0.00e+00	1531.00
IUUC-Obr-076460	Oryza brachyantha	94.66	0.00e+00	1597.00
IUUC-Ogl-077837	Oryza glaberrima	95.77	0.00e+00	1607.00
IUUC-Ogu-078912	Oryza glumaepatula	95.71	0.00e+00	1531.00
IUUC-Oin-079644	Oryza indica	95.77	0.00e+00	1603.00
IUUC-Olo-080463	Oryza longistaminata	95.31	0.00e+00	1269.00
IUUC-Ome-081748	Oryza meridionalis	95.71	0.00e+00	1526.00
IUUC-Oni-083096	Oryza nivara	95.71	0.00e+00	1530.00
IUUC-Opu-083280	Oryza punctata	94.85	0.00e+00	1626.00
IUUC-Oru-084728	Oryza rufipogon	95.71	0.00e+00	1529.00
IUUC-Osa-085295	Oryza sativa	95.77	0.00e+00	1603.00
IUUC-Ppa-095297	Physcomitrella patens	61.54	0.00e+00	1045.00
IUUC-Ppe-101567	Prunus persica	79.31	0.00e+00	1368.00
IUUC-Smo-109297	Selaginella moellendorffii	61.36	0.00e+00	1048.00
IUUC-Sit-109913	Setaria italica	98.70	0.00e+00	1660.00
IUUC-Sly-110980	Solanum lycopersicum	78.83	0.00e+00	1325.00
IUUC-Stu-112643	Solanum tuberosum	78.08	0.00e+00	1325.00
IUUC-Tca-121691	Theobroma cacao	79.91	0.00e+00	1380.00
IUUC-Tae-125302	Triticum aestivum	94.03	0.00e+00	1490.00
IUUC-Tur-126798	Triticum urartu	93.84	0.00e+00	960.00
IUUC-Vvi-131320	Vitis vinifera	81.44	0.00e+00	1193.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence