iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109297

Ensembl Protein ID

EFJ13686

UniProt Accession

D8SPK8; D8SPK8_SELML

Genbank Protein ID

EFJ13686.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377631

Gene Name

SELMODRAFT_157186

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_157186	EFJ13686	EFJ13686

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-13	49.6	211	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f...sd.tllvsGsdDgtikvWD 29
           gH++sv cl  f   s+ tllvsG+ Dg i vW+
   Q: 211  GHKGSVVCLMtFmtsSGeTLLVSGATDGFIVVWN 244
           8*******9659**8669***************9 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MLRLRAFRPS NDKIVKIQFH PTQPWLAAAD GSDAVVVWDW ENRQVLYELN AGGVDAKRLV 60
GAQLQKLAEG ESESKSKPTE AIRGGSVKHL RFYDDDVRFW QWWISRTAAV DAQSSPAQFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGAGGC TACGCGCGTT CCGCCCCAGC AACGACAAGA TCGTGAAGAT CCAATTCCAT 60
CCCACGCAGC CCTGGCTCGC AGCTGCCGAT GGATCCGACG CCGTCGTCGT CTGGGACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_157186

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000321	Aegilops tauschii	49.76	0.00e+00	785.00
IUUC-Atr-002897	Amborella trichopoda	61.67	0.00e+00	1346.00
IUUC-Aly-006154	Arabidopsis lyrata	59.81	0.00e+00	1317.00
IUUC-Ath-007285	Arabidopsis thaliana	59.98	0.00e+00	1317.00
IUUC-Bdi-014824	Brachypodium distachyon	61.43	0.00e+00	1306.00
IUUC-Bol-016428	Brassica oleracea	58.61	0.00e+00	1310.00
IUUC-Bra-017475	Brassica rapa	58.36	0.00e+00	1307.00
IUUC-Gma-043699	Glycine max	60.20	0.00e+00	1323.00
IUUC-Hvu-047404	Hordeum vulgare	58.44	2.00e-101	361.00
IUUC-Mtr-058798	Medicago truncatula	59.31	0.00e+00	1326.00
IUUC-Mac-064612	Musa acuminata	61.20	0.00e+00	1352.00
IUUC-Oba-075727	Oryza barthii	59.15	0.00e+00	1276.00
IUUC-Obr-076460	Oryza brachyantha	60.63	0.00e+00	1337.00
IUUC-Ogl-077837	Oryza glaberrima	61.28	0.00e+00	1347.00
IUUC-Ogu-078912	Oryza glumaepatula	59.15	0.00e+00	1276.00
IUUC-Oin-079644	Oryza indica	61.28	0.00e+00	1348.00
IUUC-Olo-080463	Oryza longistaminata	59.43	0.00e+00	1095.00
IUUC-Ome-081748	Oryza meridionalis	59.15	0.00e+00	1275.00
IUUC-Oni-083096	Oryza nivara	59.15	0.00e+00	1276.00
IUUC-Opu-083280	Oryza punctata	61.36	0.00e+00	1350.00
IUUC-Oru-084728	Oryza rufipogon	59.15	0.00e+00	1275.00
IUUC-Osa-085295	Oryza sativa	61.28	0.00e+00	1348.00
IUUC-Ppa-095297	Physcomitrella patens	61.88	0.00e+00	1320.00
IUUC-Ppe-101567	Prunus persica	62.69	0.00e+00	1390.00
IUUC-Sit-109913	Setaria italica	60.87	0.00e+00	1314.00
IUUC-Sly-110980	Solanum lycopersicum	61.62	0.00e+00	1288.00
IUUC-Stu-112643	Solanum tuberosum	61.62	0.00e+00	1287.00
IUUC-Sbi-114411	Sorghum bicolor	61.11	0.00e+00	1060.00
IUUC-Tca-121691	Theobroma cacao	61.40	0.00e+00	1335.00
IUUC-Tae-124034	Triticum aestivum	61.06	0.00e+00	1285.00
IUUC-Tur-126798	Triticum urartu	58.57	0.00e+00	651.00
IUUC-Vvi-131320	Vitis vinifera	62.35	0.00e+00	918.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence