iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114638

UUCD1 version

UUC-SoB-01589

Ensembl Protein ID

Sb03g000670.1

UniProt Accession

A0A1B6Q0M5; A0A1B6Q0M5_SORBI

Genbank Protein ID

KXG31475.1; KXG31476.1; KXG31477.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762; CM000762; CM000762

Gene Name

SORBI_003G005600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g000670	Sb03g000670.1	Sb03g000670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	2.50e-29	102.6	117	254

Active Site

Position(s)	Description	Evidence
198	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltk..ifhPnvyenGkvClsilk.....eee 90
           ++ e + l+k+ pe+i +++ ++   + ++++i+Gp++tpY++g+F ++++fp++YP  PPkv + +   +++Pn+ye+GkvCls+l+       e
   Q: 117  IQSEWSLLQKNLPESIYVRVYED-RTDLLRAAIVGPAGTPYHDGLFFFDVRFPSEYPKCPPKVYYHSGglRLNPNLYESGKVCLSLLNtwwgnGCE 211
           688999*****************.59*****************************************999*****************77777789* PP
   S: 91   kWsp.alsvesvllsiqsll..aepnpesplneeaaellkknr 130
           kW    +++ +vl+siq l+  ++p++++p n+++a+++  +r
   Q: 212  KWGKsNSTMLQVLVSIQGLVlnDKPYFNEPGNKNSAQTTAGER 254
           **654999***********98778***********99876655 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALKKLLQLF CVGKKDSKKK GKSIDPLWRA SASLSSVSVT ANKTHLDPCS SGTGTVCVQN 60
HEPECSSMVS SWARTEHGTE STDHMSFKQF DVVQDFSDHH YAKTSAGKVT KDWVKAIQSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATAAAACC AAAACCCTCC TCCTGCTTCC TCGGCACAAC AGCCTTCCTC CTCCCAAAGG 60
TGCGCCGCTT CTTCATCTTC TCCTTCTTCT TGATTGATCG CTGGTTTCCT GAGCTTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001018	Aegilops tauschii	62.03	1.00e-123	436.00
IUUC-Bdi-014550	Brachypodium distachyon	71.97	1.00e-146	511.00
IUUC-Lpe-051548	Leersia perrieri	71.47	2.00e-135	474.00
IUUC-Oba-075900	Oryza barthii	70.19	3.00e-140	490.00
IUUC-Obr-076306	Oryza brachyantha	72.43	1.00e-151	528.00
IUUC-Ogu-078134	Oryza glumaepatula	69.92	7.00e-139	486.00
IUUC-Oin-080044	Oryza indica	71.54	2.00e-143	501.00
IUUC-Olo-080524	Oryza longistaminata	74.58	4.00e-126	443.00
IUUC-Ome-081962	Oryza meridionalis	71.54	3.00e-143	500.00
IUUC-Oni-082462	Oryza nivara	71.54	3.00e-143	500.00
IUUC-Opu-083629	Oryza punctata	73.62	2.00e-129	454.00
IUUC-Oru-085281	Oryza rufipogon	69.92	1.00e-139	488.00
IUUC-Osa-085726	Oryza sativa	71.54	2.00e-143	501.00
IUUC-Sit-110518	Setaria italica	83.74	4.00e-170	589.00
IUUC-Tae-125714	Triticum aestivum	69.79	1.00e-146	511.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence