iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114595

UUCD1 version

UUC-SoB-00600

Ensembl Protein ID

Sb03g001960.1

UniProt Accession

A0A1B6Q0W8; A0A1B6Q0W8_SORBI

Genbank Protein ID

KXG31562.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G018500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g001960	Sb03g001960.1	Sb03g001960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-18	66.5	128	170

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+++ dg  ++ lp CgHvfh dC+ +w       + + +CP+Cr
   Q: 128  CAVCLSELADGekVRALPdCGHVFHVDCVDAW------LRSRTTCPVCR 170
           ********55555999****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSSPPSPPVP DGGGPSPFVN RQQRQEQEQL QHPDYSFSGR VLLTAVVILA MLTVVFVLIR 60
LLLYQFVARG RGSLTLGVRR SFGRRSVRHG LDASALAALP VTTYRVRRAD GGGGDGDGSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAGCC CTCCGTCGCC ACCGGTGCCC GACGGCGGCG GGCCGAGCCC GTTCGTGAAC 60
CGGCAGCAGC GGCAGGAGCA GGAGCAGCTG CAGCATCCGG ACTACAGCTT CAGCGGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000701	Aegilops tauschii	48.15	1.00e-19	89.00
IUUC-Bdi-014293	Brachypodium distachyon	51.21	5.00e-41	160.00
IUUC-Bra-017204	Brassica rapa	26.97	6.00e-27	113.00
IUUC-Hvu-047313	Hordeum vulgare	54.74	3.00e-34	137.00
IUUC-Lpe-050704	Leersia perrieri	58.22	1.00e-27	115.00
IUUC-Mpo-057321	Magnaporthe poae	47.44	1.00e-11	63.90
IUUC-Oba-075107	Oryza barthii	83.33	2.00e-19	87.80
IUUC-Obr-076113	Oryza brachyantha	61.90	8.00e-24	102.00
IUUC-Ogl-077490	Oryza glaberrima	73.12	6.00e-26	109.00
IUUC-Ogu-078358	Oryza glumaepatula	73.12	7.00e-26	109.00
IUUC-Oin-079942	Oryza indica	70.97	8.00e-26	109.00
IUUC-Olo-080853	Oryza longistaminata	52.70	8.00e-22	95.90
IUUC-Opu-083965	Oryza punctata	59.46	1.00e-25	108.00
IUUC-Oru-084479	Oryza rufipogon	73.12	6.00e-26	109.00
IUUC-Osa-085613	Oryza sativa	73.12	6.00e-26	109.00
IUUC-Sit-110143	Setaria italica	71.30	2.00e-29	121.00
IUUC-Tae-123394	Triticum aestivum	54.87	3.00e-35	140.00
IUUC-Tur-126166	Triticum urartu	72.22	3.00e-14	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence