iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028437

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

WD repeat domain 53

Genbank Nucleotide ID

CU694376

Gene Name

wdr53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000079659.4	ENSDART00000153497.2	ENSDARP00000127643.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-15	58.0	253	279

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf.sd.tllvsGsdDgtikvWDlrtg 33
           ++f s    l++G++Dg + +WD+++ 
   Q: 253  INFlSQpYWLATGGNDGLVALWDISRE 279
           445855477**************8765 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSCVWTGGHG TSILCAGVSC ESESLVATGA EGGELTLWSH DGSPVSKLRM SADDDVTCVA 60
FSPSAPCMLY ASYGRTVAVL DSRNLKSAVA ELADAGEEEI NCVSVNEAGG ALAAADDSGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGTTTTAG TATTTGCGTG ATAAAAATCA GACGCATGCG ACGTCATCAG TAAGCGACAC 60
ATGACCATAC GTCAACAACT CGCACCGGAG TAGCTGGAGC TCGTTGAAGG TTTGTGAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

dre:799626

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001203	Ailuropoda melanoleuca	47.18	2.00e-86	312.00
IUUC-Atr-002680	Amborella trichopoda	30.40	7.00e-18	85.10
IUUC-Apl-003656	Anas platyrhynchos	42.25	1.00e-63	236.00
IUUC-Aca-004987	Anolis carolinensis	49.19	3.00e-84	305.00
IUUC-Aly-006254	Arabidopsis lyrata	28.62	3.00e-20	92.80
IUUC-Ath-006632	Arabidopsis thaliana	27.76	5.00e-19	88.60
IUUC-Ame-011032	Astyanax mexicanus	53.61	6.00e-115	407.00
IUUC-Bta-012588	Bos taurus	44.24	6.00e-80	290.00
IUUC-Bdi-014532	Brachypodium distachyon	24.43	1.00e-15	77.80
IUUC-Bol-015542	Brassica oleracea	24.92	4.00e-11	63.50
IUUC-Bra-017046	Brassica rapa	29.63	2.00e-19	91.30
IUUC-Cja-019365	Callithrix jacchus	47.99	1.00e-88	319.00
IUUC-Cfa-021090	Canis familiaris	46.92	3.00e-87	315.00
IUUC-Cpo-021517	Cavia porcellus	46.26	2.00e-87	316.00
IUUC-Csa-023041	Chlorocebus sabaeus	46.11	1.00e-85	310.00
IUUC-Cho-024801	Choloepus hoffmanni	46.92	2.00e-87	315.00
IUUC-Dno-029267	Dasypus novemcinctus	47.45	1.00e-89	323.00
IUUC-Ete-032726	Echinops telfairi	39.10	9.00e-64	237.00
IUUC-Eca-033621	Equus caballus	46.11	5.00e-86	311.00
IUUC-Eeu-034461	Erinaceus europaeus	46.44	2.00e-84	306.00
IUUC-Fca-036410	Felis catus	47.84	8.00e-87	313.00
IUUC-Fal-036676	Ficedula albicollis	47.86	5.00e-89	321.00
IUUC-Gmo-039597	Gadus morhua	47.74	5.00e-32	131.00
IUUC-Gga-040760	Gallus gallus	45.24	1.00e-41	162.00
IUUC-Gac-041905	Gasterosteus aculeatus	53.35	1.00e-102	366.00
IUUC-Gma-044017	Glycine max	26.27	4.00e-18	85.90
IUUC-Ggo-044881	Gorilla gorilla	46.11	5.00e-86	311.00
IUUC-Hsa-046836	Homo sapiens	46.38	1.00e-86	313.00
IUUC-Hvu-047651	Hordeum vulgare	28.08	2.00e-14	73.90
IUUC-Itr-048206	Ictidomys tridecemlineatus	47.31	8.00e-91	327.00
IUUC-Lch-050406	Latimeria chalumnae	47.04	3.00e-76	278.00
IUUC-Loc-052878	Lepisosteus oculatus	49.87	2.00e-91	328.00
IUUC-Laf-053547	Loxodonta africana	44.24	9.00e-86	310.00
IUUC-Mcc-054646	Macaca mulatta	46.65	2.00e-87	315.00
IUUC-Meu-056381	Macropus eugenii	45.38	3.00e-88	318.00
IUUC-Mtr-058656	Medicago truncatula	26.42	7.00e-19	88.60
IUUC-Mmr-061601	Microcebus murinus	47.45	9.00e-89	320.00
IUUC-Mdo-062305	Monodelphis domestica	46.54	2.00e-90	325.00
IUUC-Mmu-063213	Mus musculus	46.26	1.00e-81	296.00
IUUC-Mac-064940	Musa acuminata	27.50	4.00e-20	92.40
IUUC-Mpu-066629	Mustela putorius furo	46.65	4.00e-87	314.00
IUUC-Nle-069860	Nomascus leucogenys	45.84	4.00e-85	308.00
IUUC-Opr-071180	Ochotona princeps	45.90	5.00e-65	241.00
IUUC-Ont-071912	Oreochromis niloticus	53.51	3.00e-111	394.00
IUUC-Ocu-074874	Oryctolagus cuniculus	48.53	2.00e-91	328.00
IUUC-Oba-075815	Oryza barthii	24.25	5.00e-09	55.50
IUUC-Obr-076835	Oryza brachyantha	32.28	4.00e-15	75.50
IUUC-Ogu-077977	Oryza glumaepatula	23.88	8.00e-09	55.10
IUUC-Oin-079206	Oryza indica	25.57	5.00e-18	85.50
IUUC-Opu-083256	Oryza punctata	24.58	2.00e-08	53.90
IUUC-Osa-085892	Oryza sativa	25.57	5.00e-18	85.50
IUUC-Ola-086701	Oryzias latipes	51.71	7.00e-106	377.00
IUUC-Oga-088152	Otolemur garnettii	46.93	3.00e-89	322.00
IUUC-Oar-089681	Ovis aries	46.11	2.00e-84	306.00
IUUC-Ptr-091142	Pan troglodytes	46.38	2.00e-86	312.00
IUUC-Pan-092435	Papio anubis	46.38	4.00e-79	288.00
IUUC-Psi-093255	Pelodiscus sinensis	47.21	4.00e-90	325.00
IUUC-Ppa-095829	Physcomitrella patens	28.79	2.00e-21	96.70
IUUC-Pfo-097339	Poecilia formosa	50.13	4.00e-101	361.00
IUUC-Pab-098274	Pongo abelii	46.11	5.00e-86	311.00
IUUC-Pop-099705	Populus trichocarpa	25.27	3.00e-22	99.40
IUUC-Pca-100451	Procavia capensis	47.17	6.00e-89	320.00
IUUC-Ppe-101220	Prunus persica	27.94	3.00e-24	105.00
IUUC-Pva-102385	Pteropus vampyrus	45.84	6.00e-87	314.00
IUUC-Rno-105765	Rattus norvegicus	46.52	3.00e-81	295.00
IUUC-Sha-106533	Sarcophilus harrisii	44.85	5.00e-89	321.00
IUUC-Smo-109248	Selaginella moellendorffii	27.49	1.00e-19	90.50
IUUC-Sit-110297	Setaria italica	34.15	4.00e-12	65.50
IUUC-Sly-111617	Solanum lycopersicum	30.64	7.00e-19	88.20
IUUC-Stu-112531	Solanum tuberosum	29.36	4.00e-18	85.90
IUUC-Sar-113647	Sorex araneus	46.38	2.00e-88	318.00
IUUC-Sbi-114621	Sorghum bicolor	26.13	1.00e-18	87.40
IUUC-Tgu-116482	Taeniopygia guttata	47.34	1.00e-82	300.00
IUUC-Tru-118622	Takifugu rubripes	51.89	7.00e-98	350.00
IUUC-Tsy-119474	Tarsius syrichta	46.81	7.00e-89	320.00
IUUC-Tni-120250	Tetraodon nigroviridis	51.61	2.00e-91	328.00
IUUC-Tca-121583	Theobroma cacao	29.25	1.00e-23	103.00
IUUC-Tae-123764	Triticum aestivum	28.08	3.00e-15	76.60
IUUC-Tbe-127545	Tupaia belangeri	45.97	1.00e-84	306.00
IUUC-Ttr-128497	Tursiops truncatus	46.38	4.00e-87	315.00
IUUC-Vpa-130772	Vicugna pacos	45.31	5.00e-84	304.00
IUUC-Vvi-131632	Vitis vinifera	27.30	9.00e-21	94.70
IUUC-Xma-133432	Xiphophorus maculatus	51.05	3.00e-106	378.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence