iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114138

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G367200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g040870	Sb03g040870.1	Sb03g040870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.20e-10	39.7	146	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f   ++ ++ lp C+H fh  C+ +w         +++CP+Cr
   Q: 146  CAICLTEFqqgDR-VRALPrCNHGFHVRCIDRW------LAARQTCPTCR 188
           ********77555.999999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSVEQLHARR LLSHAAATAA PPAVQVQVSA EHAHAHAHAA AAPAFSSLNT TVITVLSLLL 60
CGLVVVLAVH AVVRCAFRVT RRVCYGQDDE PPGGGGGGDA LAAGSSSSSS SCQAGPRRKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGTCG AACAGTTGCA TGCAAGGAGG CTCCTGTCGC ACGCCGCTGC CACGGCTGCC 60
CCGCCGGCGG TGCAGGTGCA GGTGTCTGCC GAGCACGCAC ACGCGCACGC GCACGCAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g040870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014052	Brachypodium distachyon	51.05	8.00e-33	132.00
IUUC-Hvu-047834	Hordeum vulgare	50.89	6.00e-25	106.00
IUUC-Lpe-051434	Leersia perrieri	52.38	7.00e-33	132.00
IUUC-Oba-075464	Oryza barthii	50.21	1.00e-32	131.00
IUUC-Obr-076677	Oryza brachyantha	48.19	4.00e-29	120.00
IUUC-Ogl-077523	Oryza glaberrima	49.34	2.00e-33	134.00
IUUC-Ogu-078799	Oryza glumaepatula	49.79	2.00e-32	131.00
IUUC-Oin-079317	Oryza indica	49.79	9.00e-33	132.00
IUUC-Ome-081209	Oryza meridionalis	51.50	5.00e-35	139.00
IUUC-Oni-082764	Oryza nivara	49.36	1.00e-31	128.00
IUUC-Opu-084140	Oryza punctata	58.54	2.00e-34	138.00
IUUC-Oru-084423	Oryza rufipogon	53.23	3.00e-31	127.00
IUUC-Osa-086260	Oryza sativa	49.79	6.00e-33	132.00
IUUC-Pop-098935	Populus trichocarpa	50.00	1.00e-18	85.10
IUUC-Sit-110046	Setaria italica	77.92	4.00e-47	179.00
IUUC-Tae-122737	Triticum aestivum	67.61	6.00e-26	110.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence