iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-024125

Ensembl Protein ID

ENSCSAP00000004832.1

UniProt Accession

A0A0D9R893; A0A0D9R893_CHLSB

Genbank Protein ID

ENSCSAP00000004832

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01142099

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000008574.1	ENSCSAT00000006630.1	ENSCSAP00000004832.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-09	35.8	132	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 132  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 177
           ********55553322255788*********9......4559*********8 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MSTRKRRGGA INSRQTQKRT REATSTPEIS LEAEPIELVE TAGDEIVDLT CESLEPVVVD 60
LTHNDSVVIV DERRRPRRNA GRLPQDHADS CVVSSDDEEL SRDRDVYVTT HTPRNTRDEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCACATGTA CACACATGGT TTAAACAAAA TTCCCTGAAT TTGGTAACAG TTTTTAAACA 60
TTCATGCAAA TGTCACTTCT AAGGTTCTAA AGGCATTTTT AAAAAATCAA ACCAGCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0016605--C:PML body
GO:0008270--F:zinc ion binding
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0090234--P:regulation of kinetochore assembly
GO:0090169--P:regulation of spindle assembly
GO:0046685--P:response to arsenic-containing substance

KEGG

csab:103232514

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	39.34	1.00e-10	59.70
IUUC-Aml-002206	Ailuropoda melanoleuca	93.05	6.00e-85	306.00
IUUC-Atr-002771	Amborella trichopoda	35.38	4.00e-09	54.70
IUUC-Apl-004120	Anas platyrhynchos	69.90	3.00e-70	257.00
IUUC-Aca-004236	Anolis carolinensis	63.68	6.00e-62	229.00
IUUC-Ame-011555	Astyanax mexicanus	51.55	1.00e-37	149.00
IUUC-Bta-012913	Bos taurus	85.26	1.00e-85	308.00
IUUC-Bdi-014655	Brachypodium distachyon	42.62	1.00e-10	60.10
IUUC-Bol-016418	Brassica oleracea	37.70	4.00e-09	55.10
IUUC-Bra-016890	Brassica rapa	36.84	8.00e-08	50.10
IUUC-Cel-018585	Caenorhabditis elegans	33.33	2.00e-08	52.80
IUUC-Cja-019151	Callithrix jacchus	95.29	3.00e-87	313.00
IUUC-Cfa-020868	Canis familiaris	90.00	1.00e-81	295.00
IUUC-Cpo-022249	Cavia porcellus	85.56	9.00e-73	265.00
IUUC-Cin-025749	Ciona intestinalis	40.98	1.00e-13	69.70
IUUC-Csv-026318	Ciona savignyi	40.98	6.00e-13	67.40
IUUC-Dre-028145	Danio rerio	43.75	1.00e-32	132.00
IUUC-Dno-029605	Dasypus novemcinctus	90.53	9.00e-93	332.00
IUUC-Dor-030898	Dipodomys ordii	85.79	3.00e-88	317.00
IUUC-Dme-032177	Drosophila melanogaster	42.37	1.00e-10	60.50
IUUC-Ete-032694	Echinops telfairi	84.49	1.00e-72	265.00
IUUC-Eca-033443	Equus caballus	94.21	2.00e-87	314.00
IUUC-Eeu-034603	Erinaceus europaeus	94.17	2.00e-55	207.00
IUUC-Fca-035507	Felis catus	89.84	5.00e-80	289.00
IUUC-Fal-037382	Ficedula albicollis	66.84	2.00e-63	234.00
IUUC-Gmo-038960	Gadus morhua	71.43	6.00e-19	85.90
IUUC-Gga-040493	Gallus gallus	67.69	4.00e-67	246.00
IUUC-Gac-042194	Gasterosteus aculeatus	50.34	5.00e-36	143.00
IUUC-Ggo-044726	Gorilla gorilla	98.42	1.00e-91	328.00
IUUC-Hsa-046212	Homo sapiens	98.42	1.00e-91	328.00
IUUC-Hvu-047337	Hordeum vulgare	37.70	2.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	94.65	7.00e-85	305.00
IUUC-Lpe-050920	Leersia perrieri	33.33	1.00e-10	59.70
IUUC-Loc-051907	Lepisosteus oculatus	47.59	1.00e-35	142.00
IUUC-Laf-054145	Loxodonta africana	88.24	3.00e-79	287.00
IUUC-Mcc-055689	Macaca mulatta	99.47	2.00e-92	331.00
IUUC-Meu-056654	Macropus eugenii	46.52	1.00e-39	155.00
IUUC-Mtr-058314	Medicago truncatula	45.45	1.00e-10	58.90
IUUC-Mla-058874	Melampsora laricipopulina	35.85	2.00e-04	40.80
IUUC-Mga-059303	Meleagris gallopavo	68.88	2.00e-69	254.00
IUUC-Mmr-061355	Microcebus murinus	96.32	5.00e-89	319.00
IUUC-Mdo-062968	Monodelphis domestica	65.08	4.00e-65	240.00
IUUC-Mmu-064421	Mus musculus	91.98	2.00e-93	334.00
IUUC-Mac-064573	Musa acuminata	31.68	5.00e-12	65.10
IUUC-Mpu-066522	Mustela putorius furo	93.05	5.00e-85	306.00
IUUC-Mlu-067065	Myotis lucifugus	87.70	7.00e-80	289.00
IUUC-Nle-069198	Nomascus leucogenys	96.84	3.00e-90	323.00
IUUC-Opr-071141	Ochotona princeps	87.70	9.00e-87	311.00
IUUC-Oan-073341	Ornithorhynchus anatinus	67.35	1.00e-36	144.00
IUUC-Ocu-073787	Oryctolagus cuniculus	93.58	9.00e-94	335.00
IUUC-Oba-075460	Oryza barthii	40.32	4.00e-11	61.60
IUUC-Obr-076349	Oryza brachyantha	37.70	8.00e-10	57.40
IUUC-Ogl-077094	Oryza glaberrima	36.71	4.00e-12	64.70
IUUC-Ogu-078677	Oryza glumaepatula	40.32	4.00e-11	61.60
IUUC-Oin-079992	Oryza indica	36.71	4.00e-12	64.70
IUUC-Olo-080257	Oryza longistaminata	41.94	3.00e-11	62.00
IUUC-Ome-081943	Oryza meridionalis	36.71	4.00e-12	65.50
IUUC-Oni-082671	Oryza nivara	40.32	4.00e-11	61.60
IUUC-Opu-083644	Oryza punctata	40.32	6.00e-11	61.20
IUUC-Oru-084650	Oryza rufipogon	40.32	4.00e-11	61.60
IUUC-Osa-086110	Oryza sativa	36.71	4.00e-12	64.70
IUUC-Ola-086970	Oryzias latipes	42.86	3.00e-33	134.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	2.00e-10	58.20
IUUC-Oga-088242	Otolemur garnettii	95.19	2.00e-95	341.00
IUUC-Oar-089469	Ovis aries	86.10	4.00e-89	320.00
IUUC-Ptr-091254	Pan troglodytes	92.63	2.00e-84	304.00
IUUC-Pan-092776	Papio anubis	99.47	2.00e-92	331.00
IUUC-Psi-093929	Pelodiscus sinensis	71.07	8.00e-70	256.00
IUUC-Pma-094118	Petromyzon marinus	49.38	1.00e-20	90.90
IUUC-Ppa-095567	Physcomitrella patens	44.26	2.00e-11	62.40
IUUC-Pfo-097412	Poecilia formosa	47.83	5.00e-34	137.00
IUUC-Pab-098424	Pongo abelii	97.89	3.00e-91	327.00
IUUC-Pop-099483	Populus trichocarpa	37.10	6.00e-09	53.90
IUUC-Pca-100463	Procavia capensis	84.40	5.00e-50	189.00
IUUC-Ppe-101755	Prunus persica	38.71	2.00e-09	54.70
IUUC-Pva-102594	Pteropus vampyrus	88.65	2.00e-61	228.00
IUUC-Rno-105460	Rattus norvegicus	91.53	2.00e-83	301.00
IUUC-Sha-107487	Sarcophilus harrisii	69.84	4.00e-67	246.00
IUUC-Sit-109959	Setaria italica	36.07	4.00e-05	42.40
IUUC-Stu-112694	Solanum tuberosum	39.06	3.00e-09	54.70
IUUC-Sar-113601	Sorex araneus	87.17	6.00e-78	282.00
IUUC-Sbi-114398	Sorghum bicolor	36.07	9.00e-05	40.40
IUUC-Ssc-115911	Sus scrofa	92.63	1.00e-85	308.00
IUUC-Tgu-117264	Taeniopygia guttata	67.20	4.00e-61	226.00
IUUC-Tru-117663	Takifugu rubripes	48.50	2.00e-36	144.00
IUUC-Tsy-118883	Tarsius syrichta	87.84	1.00e-67	248.00
IUUC-Tvi-122382	Trichoderma virens	34.57	5.00e-05	41.60
IUUC-Tae-124872	Triticum aestivum	39.34	1.00e-10	60.10
IUUC-Tur-126408	Triticum urartu	39.34	1.00e-10	60.10
IUUC-Ttr-128950	Tursiops truncatus	64.74	4.00e-65	240.00
IUUC-Vvi-130833	Vitis vinifera	40.32	4.00e-10	58.50
IUUC-Xtr-132879	Xenopus tropicalis	60.39	2.00e-40	157.00
IUUC-Xma-133319	Xiphophorus maculatus	46.26	7.00e-32	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence