iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080627

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539991.1_FG013	KN539991.1_FGT013	KN539991.1_FGP013

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-12	45.8	187	222

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla +d+ + sGs+D+t+kvW++++ ++l 
   Q: 187  HADSISCLAVHDGVVYSGSWDKTLKVWRISDLKCLE 222
           9********9779****************9999986 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAMPLRDPTD RAAMSAPLLP RSAFVSSASF SSFSSVASFS STSSSFSDPA VPSDVVEALP 60
MSRDSFKALA VLRDHQGSVS SLSLCGEFLL SASTGADIVA WQQPDLRRFA RFGHGEGSVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAATGC CATTGCGGGA TCCAACAGAC CGCGCTGCTA TGTCCGCGCC GTTGCTCCCG 60
CGTTCCGCCT TCGTCTCCTC CGCATCGTTC TCCTCCTTTT CGTCCGTCGC CTCGTTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	57.85	4.00e-75	274.00
IUUC-Aly-005620	Arabidopsis lyrata	55.56	6.00e-75	273.00
IUUC-Ath-006729	Arabidopsis thaliana	55.07	7.00e-75	273.00
IUUC-Bdi-014229	Brachypodium distachyon	72.40	8.00e-78	283.00
IUUC-Bol-015324	Brassica oleracea	68.78	6.00e-71	260.00
IUUC-Bra-017666	Brassica rapa	68.25	3.00e-70	258.00
IUUC-Gma-042769	Glycine max	64.10	5.00e-78	283.00
IUUC-Hvu-047162	Hordeum vulgare	75.00	2.00e-51	195.00
IUUC-Lpe-050845	Leersia perrieri	74.16	3.00e-82	297.00
IUUC-Mtr-058525	Medicago truncatula	56.67	2.00e-76	278.00
IUUC-Mac-064928	Musa acuminata	58.95	7.00e-65	239.00
IUUC-Oba-075989	Oryza barthii	92.69	1.00e-125	441.00
IUUC-Obr-076522	Oryza brachyantha	94.93	1.00e-116	412.00
IUUC-Ogl-077747	Oryza glaberrima	93.02	5.00e-126	443.00
IUUC-Ogu-078306	Oryza glumaepatula	93.02	1.00e-125	442.00
IUUC-Oin-079397	Oryza indica	92.03	2.00e-124	438.00
IUUC-Ome-081295	Oryza meridionalis	92.38	6.00e-125	439.00
IUUC-Oni-082259	Oryza nivara	93.02	5.00e-126	443.00
IUUC-Opu-083686	Oryza punctata	91.36	2.00e-121	428.00
IUUC-Oru-084598	Oryza rufipogon	92.03	2.00e-124	438.00
IUUC-Osa-085705	Oryza sativa	93.02	5.00e-126	443.00
IUUC-Pop-099519	Populus trichocarpa	63.87	7.00e-79	286.00
IUUC-Ppe-101179	Prunus persica	62.18	7.00e-77	280.00
IUUC-Sit-109966	Setaria italica	75.25	4.00e-95	340.00
IUUC-Sly-111222	Solanum lycopersicum	64.35	6.00e-74	270.00
IUUC-Stu-112315	Solanum tuberosum	61.16	3.00e-76	278.00
IUUC-Sbi-114323	Sorghum bicolor	70.42	1.00e-91	329.00
IUUC-Tca-121448	Theobroma cacao	62.08	4.00e-78	284.00
IUUC-Tae-123485	Triticum aestivum	67.97	2.00e-84	305.00
IUUC-Vvi-131470	Vitis vinifera	62.61	1.00e-77	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence