iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014900

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100822033; BRADI_3g02220

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G02220	BRADI3G02220.1	BRADI3G02220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.30e-08	34.6	26	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cg+g++   +l+ C+ C++ +H  Cl +   + +p  + w+Cp+C+s
   Q: 26   VRCEACGSGDAAA-ELLLCDGCDRGLHIFCLRPI-LPRVPAGD-WFCPSCSS 74
           5799999999987.5******************9.*******7.******87 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSPAPQQRRR TRARRPARYR DDEDEVRCEA CGSGDAAAEL LLCDGCDRGL HIFCLRPILP 60
RVPAGDWFCP SCSSAASPAK SSSAAAMTKM PKEFPLVQTK IVDFFKIQRG PVSAAAAGGE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCCCCG CCCCGCAGCA GCGCCGCCGG ACGCGCGCGC GGCGTCCGGC CAGGTACCGC 60
GACGACGAAG ACGAGGTCAG GTGCGAGGCG TGCGGGTCCG GCGACGCGGC GGCAGAGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001214--SET_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50280--SET
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD
PF00856--SET

SMART

SM00249--PHD
SM00317--SET

Gene Ontology

GO:0005634--C:nucleus
GO:0046976--F:histone methyltransferase activity (H3-K27 specific)
GO:0008270--F:zinc ion binding
GO:0009901--P:anther dehiscence
GO:0051726--P:regulation of cell cycle
GO:0006275--P:regulation of DNA replication

KEGG

bdi:100822033

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002978	Amborella trichopoda	68.95	5.00e-97	346.00
IUUC-Gma-044242	Glycine max	51.85	4.00e-23	99.40
IUUC-Lpe-051351	Leersia perrieri	82.18	1.00e-141	495.00
IUUC-Mtr-057790	Medicago truncatula	68.36	3.00e-118	417.00
IUUC-Oba-075648	Oryza barthii	61.26	2.00e-112	397.00
IUUC-Obr-076539	Oryza brachyantha	60.67	1.00e-110	391.00
IUUC-Ogl-076971	Oryza glaberrima	61.56	6.00e-113	399.00
IUUC-Ogu-078790	Oryza glumaepatula	61.56	4.00e-113	400.00
IUUC-Oin-079240	Oryza indica	61.56	2.00e-113	400.00
IUUC-Ome-081195	Oryza meridionalis	61.26	8.00e-113	399.00
IUUC-Oni-082728	Oryza nivara	61.56	6.00e-113	399.00
IUUC-Opu-083473	Oryza punctata	61.93	5.00e-114	402.00
IUUC-Oru-084688	Oryza rufipogon	61.56	6.00e-113	399.00
IUUC-Pop-099061	Populus trichocarpa	70.98	2.00e-120	424.00
IUUC-Sit-109938	Setaria italica	81.01	6.00e-142	496.00
IUUC-Sbi-114173	Sorghum bicolor	77.61	2.00e-140	491.00
IUUC-Tca-120995	Theobroma cacao	69.46	2.00e-127	447.00
IUUC-Tae-124910	Triticum aestivum	78.82	1.00e-133	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence