iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__2272__AT1G20823.1	fgenesh2_kg.1__2272__AT1G20823.1	fgenesh2_kg.1__2272__AT1G20823.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-09	37.7	111	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   d+++vlp CgH fh +C+  w         + +CP Cr
   Q: 111  CAICLAEFsaGDELRVLPqCGHGFHVSCIDTW------LGSHSSCPSCR 153
           ********88555*******************......99********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MARLLFRLLV ESNTPSPAID NSNAALNSDL VVILAALLCA LICVLGLIAV SRCVWLRRFA 60
AGNRTASGSQ GQSPPPPVAA ANKGLKKKVL QSLPKLAFSP ESPESEKFVE CAICLAEFSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCAAACT CAAATCAATC TTCTTCCATT TTTCAAATTT TATACACAAC AACAACAACA 60
ACAAAACTTC TTACTCGCTA GAAATGGCTC GCCTTCTCTT CCGTCTTCTC GTAGAATCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0070417--P:cellular response to cold
GO:0009909--P:regulation of flower development
GO:0010966--P:regulation of phosphate transport
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_472318

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000545	Aegilops tauschii	54.12	3.00e-21	93.60
IUUC-Ath-007319	Arabidopsis thaliana	94.92	4.00e-81	292.00
IUUC-Bol-016283	Brassica oleracea	79.00	9.00e-65	238.00
IUUC-Bra-018076	Brassica rapa	84.77	3.00e-67	246.00
IUUC-Hvu-047055	Hordeum vulgare	47.45	3.00e-29	119.00
IUUC-Lpe-050856	Leersia perrieri	47.55	1.00e-25	108.00
IUUC-Oba-075502	Oryza barthii	48.50	1.00e-28	118.00
IUUC-Obr-076446	Oryza brachyantha	48.92	5.00e-30	122.00
IUUC-Ogl-077507	Oryza glaberrima	47.90	4.00e-28	116.00
IUUC-Ogu-078762	Oryza glumaepatula	48.50	2.00e-28	118.00
IUUC-Oin-079945	Oryza indica	53.23	1.00e-30	124.00
IUUC-Ome-081340	Oryza meridionalis	47.93	6.00e-24	102.00
IUUC-Oni-082529	Oryza nivara	46.71	5.00e-34	138.00
IUUC-Opu-083589	Oryza punctata	47.55	3.00e-26	112.00
IUUC-Oru-084673	Oryza rufipogon	47.90	4.00e-28	116.00
IUUC-Osa-085373	Oryza sativa	47.90	2.00e-28	118.00
IUUC-Tae-123836	Triticum aestivum	50.46	2.00e-24	104.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence