iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044008

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000835

Gene Name

LOC100790180; GLYMA_02G164700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G24612	GLYMA02G24612.1	GLYMA02G24612.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-30	104.1	674	711
UBD/Beta-Prp	1.30e-47	164.1	502	641

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v+c+++ ++ ++l+s s   ++kvW+l +g +++
   Q: 674  GHSAEVRCVCWdTNgDYLASVSQE-SVKVWSLASGECIH 711
           8**********9666*******65.9**********987 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg.kllrtltggh 179
           v ++++ +++v++++fs +g+ l+s++hd+ + +w++et q  + t ++h+ +++ v++ p++  l+++s D+tvrlWd +   + l+t +g h
   Q: 502  VGSIRKSNSKVVCCHFSSDGKLLASAGHDKKVVLWNMETLQTES-TPEEHSLIITDVRFRPNSTQLATSSFDTTVRLWDAADPtFPLHTYSG-H 593
           5678889************************************9.***********************************6651679***99.* PP
   S: 180  tdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvk 226
           t+ v sl+f++++ + + s+++++ +++w++++ +  r+++g +++v+
   Q: 594  TSHVVSLDFHPKKtELFCSCDNNNEIRFWSISQYSSTRIFKGGSTQVR 641
           ***********9967789**************99999***99999886 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIYDYL VKKKLHNTAK AFMTEGKVSP DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSETAAAYLE AQQIKAKEQQ QLQMQQLQLM RQAQMQRRDS NHPPLGGPVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATACTCCA GTACGGAAAA GCTAGGTACG CCCGAACCTC CATCCCAGCT TCGGTTTTTA 60
TTACCGAGCC TCAGCTTCGA AGCTTCATTC ATTATTCAAA CTTTCATCTT TCACCATAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006471	Arabidopsis lyrata	73.39	0.00e+00	1026.00
IUUC-Ath-007671	Arabidopsis thaliana	71.27	0.00e+00	1014.00
IUUC-Bdi-014855	Brachypodium distachyon	63.29	0.00e+00	958.00
IUUC-Bol-016419	Brassica oleracea	70.24	0.00e+00	1041.00
IUUC-Bra-017537	Brassica rapa	68.45	0.00e+00	1004.00
IUUC-Lpe-051527	Leersia perrieri	64.38	0.00e+00	950.00
IUUC-Mac-064608	Musa acuminata	65.50	0.00e+00	941.00
IUUC-Oba-075243	Oryza barthii	62.64	0.00e+00	942.00
IUUC-Obr-076847	Oryza brachyantha	63.38	0.00e+00	937.00
IUUC-Ogl-076931	Oryza glaberrima	64.32	0.00e+00	977.00
IUUC-Ogu-077963	Oryza glumaepatula	62.50	0.00e+00	931.00
IUUC-Oin-079144	Oryza indica	64.07	0.00e+00	971.00
IUUC-Olo-080947	Oryza longistaminata	60.38	0.00e+00	888.00
IUUC-Ome-081723	Oryza meridionalis	61.69	0.00e+00	924.00
IUUC-Oni-083067	Oryza nivara	64.20	0.00e+00	974.00
IUUC-Opu-083429	Oryza punctata	64.49	0.00e+00	976.00
IUUC-Oru-084534	Oryza rufipogon	62.64	0.00e+00	933.00
IUUC-Osa-085788	Oryza sativa	64.07	0.00e+00	973.00
IUUC-Sit-110618	Setaria italica	63.67	0.00e+00	961.00
IUUC-Sbi-114046	Sorghum bicolor	65.35	0.00e+00	984.00
IUUC-Tae-125446	Triticum aestivum	63.61	0.00e+00	959.00
IUUC-Tur-126636	Triticum urartu	61.83	0.00e+00	856.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence