iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014470

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100834712; BRADI_3g50140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G50140	BRADI3G50140.1	BRADI3G50140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-09	37.9	127	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+++        ++ ++vlp CgH fh  C+  w         +++CP+Cr
   Q: 127  CAICLSELeadadgedQR-VRVLPaCGHGFHGACVDGW------LAARASCPTCR 174
           ********9888887555.*******************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MARGANHTAS RSPPMNATAA TITTTPSRSP PPTPADAWGP YASSRAFFSN VATILIILAC 60
VSLLAFSLHA AARFLVRRLA RRRASASAHA QPHPPKPPSD DAAAAGCSVE SGAASVELAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCACGCG GGGCCAACCA CACCGCGTCG CGGTCGCCCC CCATGAACGC CACGGCAGCC 60
ACCATCACCA CCACCCCGTC TCGGTCTCCG CCTCCCACCC CCGCCGACGC CTGGGGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100834712

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025371	Ciona intestinalis	40.62	1.00e-09	55.50
IUUC-Hvu-047182	Hordeum vulgare	71.73	5.00e-42	162.00
IUUC-Lpe-051228	Leersia perrieri	65.13	1.00e-32	132.00
IUUC-Oin-079938	Oryza indica	85.94	5.00e-25	106.00
IUUC-Ome-082011	Oryza meridionalis	72.11	8.00e-33	132.00
IUUC-Oni-082222	Oryza nivara	85.94	5.00e-25	106.00
IUUC-Opu-083539	Oryza punctata	72.66	3.00e-28	117.00
IUUC-Oru-084511	Oryza rufipogon	85.94	7.00e-25	105.00
IUUC-Osa-085552	Oryza sativa	85.94	7.00e-25	105.00
IUUC-Sbi-114337	Sorghum bicolor	66.67	4.00e-08	50.10
IUUC-Tae-124212	Triticum aestivum	73.94	2.00e-42	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence