iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114256

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G227100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g026250	Sb04g026250.1	Sb04g026250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-06	28.8	82	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg....plvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           CaiC++++k g    +++  C H+fh++C+   +      + ++  CP+Cr
   Q: 82   CAICFDSMKPGhgqaLFTAECSHMFHFHCIsSSV------KHGNHVCPVCR 126
           ********444444499999*********95555......9*********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEGVWRKAKR ALGASLCVHL PAVASDREDG GASERRASDA LSSIDSAAAA HASAPTTPAA 60
PEAAAALLRR SKSGGKSSKR MCAICFDSMK PGHGQALFTA ECSHMFHFHC ISSSVKHGNH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGGGG TGTGGAGGAA GGCCAAGAGG GCGCTGGGCG CCAGCCTCTG CGTGCACCTC 60
CCCGCCGTCG CCAGCGACCG CGAGGACGGC GGCGCCAGCG AGCGCCGCGC CTCGGATGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032838--Vwaint_dom
IPR002035--VWF_A
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50234--VWFA
PS50089--ZF_RING_2

Pfam

PF00092--VWA
PF14624--Vwaint
PF17123--zf-RING_11

SMART

SM00184--RING
SM00327--VWA

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_01g019910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000092	Aegilops tauschii	81.91	0.00e+00	1072.00
IUUC-Bdi-014237	Brachypodium distachyon	81.37	0.00e+00	1102.00
IUUC-Lpe-050690	Leersia perrieri	81.50	0.00e+00	1023.00
IUUC-Oba-075654	Oryza barthii	81.58	0.00e+00	1050.00
IUUC-Ogl-077894	Oryza glaberrima	81.43	0.00e+00	1048.00
IUUC-Ogu-078843	Oryza glumaepatula	81.24	0.00e+00	1053.00
IUUC-Oin-079912	Oryza indica	81.10	0.00e+00	1050.00
IUUC-Olo-080487	Oryza longistaminata	76.41	0.00e+00	989.00
IUUC-Oni-082618	Oryza nivara	81.10	0.00e+00	1050.00
IUUC-Opu-084167	Oryza punctata	81.81	0.00e+00	1055.00
IUUC-Oru-084313	Oryza rufipogon	81.29	0.00e+00	1046.00
IUUC-Osa-085938	Oryza sativa	81.10	0.00e+00	1059.00
IUUC-Sit-109961	Setaria italica	53.91	5.00e-167	580.00
IUUC-Tvi-122295	Trichoderma virens	42.86	1.00e-06	47.00
IUUC-Tae-123973	Triticum aestivum	81.93	0.00e+00	1077.00
IUUC-Tur-126698	Triticum urartu	83.94	0.00e+00	1032.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence