iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114657

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G169300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g022080	Sb04g022080.1	Sb04g022080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.50e-34	117.2	11	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwl.asggktcPvtrqpl..teedlvPnltlrrliqawceenss 74
           evp++flCpIsle+MrdPv+l++Gitydr+sIe+wl a+g+ tcPvtr+ l  +e d +Pn+tlrrliqawc+++++
   Q: 11   EVPHYFLCPISLEVMRDPVTLATGITYDRASIERWLfADGHATCPVTRRALapAEMDATPNHTLRRLIQAWCAAHQV 87
           69**********************************777777*********7667777****************997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEVSSSSAAA EVPHYFLCPI SLEVMRDPVT LATGITYDRA SIERWLFADG HATCPVTRRA 60
LAPAEMDATP NHTLRRLIQA WCAAHQVERF PTPRPPLDSC RVAALLDEGR HGGDRQAAAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTCT CGTCGTCCTC GGCGGCGGCG GAGGTCCCCC ACTATTTTCT CTGCCCGATC 60
TCGCTGGAGG TGATGCGTGA CCCGGTCACG CTCGCCACCG GCATCACCTA CGACCGCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_04g022080

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014627	Brachypodium distachyon	71.46	6.00e-149	519.00
IUUC-Bol-015755	Brassica oleracea	46.70	2.00e-100	357.00
IUUC-Bra-016841	Brassica rapa	47.17	6.00e-102	363.00
IUUC-Hvu-047293	Hordeum vulgare	75.00	2.00e-150	524.00
IUUC-Lpe-051695	Leersia perrieri	64.76	2.00e-116	411.00
IUUC-Oba-075115	Oryza barthii	59.42	6.00e-75	273.00
IUUC-Obr-076783	Oryza brachyantha	57.74	6.00e-73	266.00
IUUC-Ogu-079030	Oryza glumaepatula	70.55	1.00e-128	452.00
IUUC-Oin-079734	Oryza indica	70.11	1.00e-128	452.00
IUUC-Ome-081360	Oryza meridionalis	68.68	3.00e-125	441.00
IUUC-Oni-082818	Oryza nivara	69.86	3.00e-130	457.00
IUUC-Opu-083355	Oryza punctata	70.18	1.00e-135	475.00
IUUC-Oru-085239	Oryza rufipogon	70.55	8.00e-129	452.00
IUUC-Osa-086041	Oryza sativa	70.55	1.00e-128	452.00
IUUC-Sit-110734	Setaria italica	84.49	4.00e-171	593.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence