iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131590

UUCD1 version

UUC-ViV-00215

Ensembl Protein ID

VIT_04s0043g00840.t01

UniProt Accession

D7TDU7; D7TDU7_VITVI

Genbank Protein ID

CBI28670.3

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595763

Gene Name

VIT_04s0043g00840

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0043g00840	VIT_04s0043g00840.t01	VIT_04s0043g00840.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-32	112.2	73	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIs++lMrdPvv+++G+tydr  I+kwl++g++tcP t+q l+++ l+Pn+ +r++i++wc+e+++
   Q: 73   LPQEFRCPISKQLMRDPVVVATGQTYDRPFIQKWLKDGHRTCPRTQQVLSHTILTPNNLVREMISEWCKEHGI 145
           69********************************************************************987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAKFGVLETD PSMAAKATEE LKKELQRLVS RIVDEDESCA DTTDKALKIL FALRDFKFKG 60
SLDFGVETEN PALPQEFRCP ISKQLMRDPV VVATGQTYDR PFIQKWLKDG HRTCPRTQQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTTCATG TTTCATCTTC ATGGCCAAGT TTGGGGTCTT GGAAACTGAT CCATCCATGG 60
CAGCCAAGGC CACAGAGGAG CTGAAGAAGG AGTTGCAGAG GCTGGTGAGC AGAATTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100267223

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	44.07	2.00e-89	322.00
IUUC-Bdi-014069	Brachypodium distachyon	55.56	6.00e-121	426.00
IUUC-Lpe-050825	Leersia perrieri	54.17	4.00e-118	417.00
IUUC-Mac-065616	Musa acuminata	56.53	4.00e-127	447.00
IUUC-Oba-075311	Oryza barthii	54.84	6.00e-114	402.00
IUUC-Obr-076232	Oryza brachyantha	54.57	8.00e-115	405.00
IUUC-Ogl-077647	Oryza glaberrima	54.24	9.00e-119	419.00
IUUC-Ogu-078448	Oryza glumaepatula	54.50	2.00e-119	421.00
IUUC-Oin-079693	Oryza indica	54.84	4.00e-114	403.00
IUUC-Olo-080462	Oryza longistaminata	54.55	2.00e-119	421.00
IUUC-Ome-081796	Oryza meridionalis	54.55	2.00e-118	418.00
IUUC-Oni-082158	Oryza nivara	54.50	2.00e-119	421.00
IUUC-Opu-084131	Oryza punctata	54.81	1.00e-119	422.00
IUUC-Oru-084335	Oryza rufipogon	54.50	2.00e-119	421.00
IUUC-Osa-085556	Oryza sativa	54.50	3.00e-119	421.00
IUUC-Pop-099087	Populus trichocarpa	73.63	0.00e+00	641.00
IUUC-Sit-110812	Setaria italica	54.17	2.00e-115	408.00
IUUC-Sbi-114814	Sorghum bicolor	54.81	1.00e-116	412.00
IUUC-Tae-123657	Triticum aestivum	48.28	1.00e-95	342.00
IUUC-Tur-126060	Triticum urartu	43.71	3.00e-90	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence