iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095302

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544928

Gene Name

PHYPADRAFT_122328

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S39_105V6	PP1S39_105V6.1	PP1S39_105V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-17	63.0	222	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdDgtikvWDlrtg 33
            v+ ++f   + +l+++G+  g++k+WD+r g
   Q: 222  VVNVVRFhpLEgNLFITGGSKGSVKLWDVRLG 253
           5788899985559***************9866 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDALIQAYDD RDEEEEEHES YHQQPQKRPK FVSASPLSLP PPLPLRPHSQ PPLPPTSAGV 60
PGRYVSKRER AAIAATALAP NPTSPVRPPL ELASVLNAKL PHRIQRKLDH SLGNAGGCNR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTTGTTG TTGTGTGGTG TTGGACGTGA AGGTGGGACT TGGGCTGGTA ATTGGTTTAG 60
GTGGGCACAA GACATGCTCC TCCTTCGCCA TGGATGCTCT CATTCAAGCA TACGATGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_122328

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001588	Ailuropoda melanoleuca	37.97	7.00e-64	237.00
IUUC-Atr-003155	Amborella trichopoda	46.82	1.00e-101	362.00
IUUC-Apl-003544	Anas platyrhynchos	40.76	1.00e-56	211.00
IUUC-Aly-006510	Arabidopsis lyrata	46.15	5.00e-103	367.00
IUUC-Ath-007329	Arabidopsis thaliana	47.48	3.00e-105	374.00
IUUC-Ame-010607	Astyanax mexicanus	39.90	2.00e-44	171.00
IUUC-Bta-013542	Bos taurus	36.36	1.00e-61	229.00
IUUC-Bdi-014736	Brachypodium distachyon	46.19	1.00e-104	372.00
IUUC-Bol-016112	Brassica oleracea	48.04	4.00e-104	370.00
IUUC-Bra-016685	Brassica rapa	49.60	2.00e-106	378.00
IUUC-Cja-018883	Callithrix jacchus	37.66	4.00e-61	228.00
IUUC-Cfa-021278	Canis familiaris	37.66	2.00e-63	236.00
IUUC-Cpo-022449	Cavia porcellus	37.30	4.00e-61	227.00
IUUC-Csa-023916	Chlorocebus sabaeus	37.34	2.00e-61	229.00
IUUC-Csv-026371	Ciona savignyi	26.95	9.00e-29	119.00
IUUC-Eca-033484	Equus caballus	37.62	3.00e-63	235.00
IUUC-Fca-035673	Felis catus	37.66	6.00e-63	234.00
IUUC-Fal-036795	Ficedula albicollis	39.38	9.00e-76	276.00
IUUC-Gmo-039062	Gadus morhua	38.77	3.00e-59	220.00
IUUC-Gga-040773	Gallus gallus	41.07	1.00e-69	255.00
IUUC-Gac-042364	Gasterosteus aculeatus	38.77	4.00e-60	223.00
IUUC-Gma-043100	Glycine max	46.42	2.00e-99	355.00
IUUC-Ggo-045220	Gorilla gorilla	37.34	1.00e-61	229.00
IUUC-Hsa-046511	Homo sapiens	37.34	2.00e-61	229.00
IUUC-Hvu-047431	Hordeum vulgare	44.93	1.00e-94	338.00
IUUC-Lch-049590	Latimeria chalumnae	40.44	2.00e-65	241.00
IUUC-Lpe-050810	Leersia perrieri	50.56	1.00e-76	279.00
IUUC-Loc-052196	Lepisosteus oculatus	38.52	2.00e-75	275.00
IUUC-Mcc-055622	Macaca mulatta	37.03	8.00e-61	227.00
IUUC-Mtr-058041	Medicago truncatula	47.31	6.00e-96	343.00
IUUC-Mga-060149	Meleagris gallopavo	41.15	5.00e-58	216.00
IUUC-Mmr-061552	Microcebus murinus	37.26	9.00e-61	227.00
IUUC-Mdo-061969	Monodelphis domestica	34.83	8.00e-69	253.00
IUUC-Mmu-063343	Mus musculus	37.66	6.00e-61	227.00
IUUC-Mac-065079	Musa acuminata	47.61	1.00e-93	335.00
IUUC-Mpu-065949	Mustela putorius furo	37.65	3.00e-46	178.00
IUUC-Ont-072361	Oreochromis niloticus	36.93	3.00e-68	251.00
IUUC-Oba-075367	Oryza barthii	46.54	2.00e-89	322.00
IUUC-Obr-076738	Oryza brachyantha	46.42	6.00e-95	340.00
IUUC-Ogu-078590	Oryza glumaepatula	46.05	1.00e-89	322.00
IUUC-Oin-079678	Oryza indica	46.81	1.00e-95	342.00
IUUC-Olo-080453	Oryza longistaminata	49.28	2.00e-88	318.00
IUUC-Ome-081794	Oryza meridionalis	46.58	9.00e-77	279.00
IUUC-Oni-082432	Oryza nivara	46.81	1.00e-95	342.00
IUUC-Opu-083897	Oryza punctata	45.88	2.00e-95	342.00
IUUC-Oru-085068	Oryza rufipogon	45.43	1.00e-87	316.00
IUUC-Osa-085805	Oryza sativa	46.81	1.00e-95	342.00
IUUC-Ola-087567	Oryzias latipes	39.29	4.00e-62	230.00
IUUC-Oga-088168	Otolemur garnettii	35.89	5.00e-60	224.00
IUUC-Oar-090158	Ovis aries	35.11	4.00e-54	205.00
IUUC-Pan-092157	Papio anubis	37.34	2.00e-61	229.00
IUUC-Psi-093817	Pelodiscus sinensis	43.32	1.00e-68	252.00
IUUC-Pma-094263	Petromyzon marinus	45.14	1.00e-42	164.00
IUUC-Pfo-097526	Poecilia formosa	37.13	7.00e-70	257.00
IUUC-Pab-098152	Pongo abelii	36.99	2.00e-53	202.00
IUUC-Pop-099987	Populus trichocarpa	47.34	2.00e-104	371.00
IUUC-Ppe-101575	Prunus persica	46.86	8.00e-103	366.00
IUUC-Pva-102942	Pteropus vampyrus	37.70	7.00e-62	230.00
IUUC-Rno-104857	Rattus norvegicus	37.66	5.00e-61	228.00
IUUC-Sha-106763	Sarcophilus harrisii	38.73	3.00e-69	255.00
IUUC-Sit-110488	Setaria italica	45.60	2.00e-95	342.00
IUUC-Sly-110893	Solanum lycopersicum	47.88	1.00e-99	355.00
IUUC-Stu-112566	Solanum tuberosum	48.01	6.00e-99	353.00
IUUC-Sar-113617	Sorex araneus	36.03	2.00e-26	112.00
IUUC-Sbi-114566	Sorghum bicolor	45.29	2.00e-100	358.00
IUUC-Tgu-117015	Taeniopygia guttata	39.38	2.00e-76	278.00
IUUC-Tca-121587	Theobroma cacao	49.08	9.00e-104	369.00
IUUC-Tae-123717	Triticum aestivum	46.77	5.00e-98	350.00
IUUC-Ttr-129033	Tursiops truncatus	36.99	1.00e-62	233.00
IUUC-Vvi-131505	Vitis vinifera	47.04	3.00e-105	374.00
IUUC-Xma-133463	Xiphophorus maculatus	37.90	1.00e-72	266.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence