iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079379

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA006852	BGIOSGA006852-TA	BGIOSGA006852-PA

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-10	41.6	418	441

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlr 31
           ++  d  ++++Gs+ +  +v+  +
   Q: 418  CLsGDgLRVATGSYSNLFRVFGCT 441
           334355779*****9999998765 PP

Organism

Oryza indica

Protein Sequence
(Fasta)

MDPFSKSPDD DDLRPEAEAA RRPQPQPQPR EWRFAQVFGE RAAGEDVQEV DIISAIEFDK 60
SGDHLATGDR GGRVVLFERT DSRDSASRSE LERQDYPIAR HPEFRYKTEF QSHEPEFDYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCCCT TCTCCAAGTC CCCCGACGAC GACGACCTCC GCCCCGAGGC GGAGGCGGCG 60
AGGCGGCCGC AGCCGCAGCC GCAGCCGCGG GAGTGGCGGT TCGCGCAGGT CTTCGGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000361	Aegilops tauschii	87.24	0.00e+00	847.00
IUUC-Atr-002520	Amborella trichopoda	80.92	0.00e+00	813.00
IUUC-Aly-006304	Arabidopsis lyrata	78.02	0.00e+00	815.00
IUUC-Ath-007621	Arabidopsis thaliana	78.63	0.00e+00	822.00
IUUC-Bdi-014375	Brachypodium distachyon	88.76	0.00e+00	864.00
IUUC-Gma-044053	Glycine max	83.13	0.00e+00	820.00
IUUC-Hvu-047640	Hordeum vulgare	87.43	0.00e+00	855.00
IUUC-Mtr-058561	Medicago truncatula	82.09	0.00e+00	789.00
IUUC-Mac-065063	Musa acuminata	83.43	0.00e+00	840.00
IUUC-Oba-075715	Oryza barthii	99.39	0.00e+00	976.00
IUUC-Ogl-077016	Oryza glaberrima	99.80	0.00e+00	985.00
IUUC-Ogu-078251	Oryza glumaepatula	99.60	0.00e+00	979.00
IUUC-Olo-080525	Oryza longistaminata	99.58	0.00e+00	939.00
IUUC-Ome-081711	Oryza meridionalis	99.39	0.00e+00	966.00
IUUC-Oni-082387	Oryza nivara	99.18	0.00e+00	957.00
IUUC-Opu-083739	Oryza punctata	97.98	0.00e+00	979.00
IUUC-Oru-084892	Oryza rufipogon	99.81	0.00e+00	1000.00
IUUC-Osa-085869	Oryza sativa	100.00	0.00e+00	988.00
IUUC-Pop-099639	Populus trichocarpa	79.68	0.00e+00	798.00
IUUC-Smo-109273	Selaginella moellendorffii	68.34	0.00e+00	694.00
IUUC-Sit-110289	Setaria italica	88.34	0.00e+00	925.00
IUUC-Sly-111422	Solanum lycopersicum	81.89	0.00e+00	798.00
IUUC-Stu-111999	Solanum tuberosum	77.00	0.00e+00	762.00
IUUC-Sbi-114830	Sorghum bicolor	90.55	0.00e+00	875.00
IUUC-Tca-121708	Theobroma cacao	83.30	0.00e+00	824.00
IUUC-Tae-125296	Triticum aestivum	87.43	0.00e+00	852.00
IUUC-Tur-126432	Triticum urartu	89.33	0.00e+00	800.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence