iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111536

Ensembl Protein ID

Solyc11g005190.1.1

UniProt Accession

K4D4D2; K4D4D2_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g005190.1	Solyc11g005190.1.1	Solyc11g005190.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-25	87.0	145	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtll.vsGsdDgtikvWDlrtgv 34
           +v+++++  sd+ l +sGsdDgt+++WD+r+g+
   Q: 145  RVWSIDYcqSDPVLgASGSDDGTMQMWDPRCGD 177
           599***998889999**************9997 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MTDISSILHQ EEKEEKARCE WDFHLSTIIS SCNNLSGSGC DTIGVLEFDP CGNFLASGGI 60
ARKIRIYTVK SVQGERRIGD APLALDHSNA CDFFICTPAK LGSIKWKPGL GSRVLGSGDY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGATA TTTCATCAAT TTTGCATCAA GAAGAAAAAG AAGAAAAAGC AAGATGTGAA 60
TGGGATTTTC ATCTTTCTAC TATTATTTCA TCTTGTAATA ATCTTAGTGG ATCTGGTTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sly:101259391

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	44.47	1.00e-89	322.00
IUUC-Aly-005431	Arabidopsis lyrata	57.32	1.00e-111	395.00
IUUC-Ath-006939	Arabidopsis thaliana	57.32	3.00e-107	380.00
IUUC-Bdi-014616	Brachypodium distachyon	43.03	7.00e-61	227.00
IUUC-Bol-015816	Brassica oleracea	54.55	1.00e-103	368.00
IUUC-Bra-016672	Brassica rapa	57.71	2.00e-112	398.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	33.81	2.00e-42	165.00
IUUC-Ogl-077687	Oryza glaberrima	42.82	1.00e-64	239.00
IUUC-Oin-079632	Oryza indica	42.05	4.00e-63	234.00
IUUC-Ome-081923	Oryza meridionalis	41.78	5.00e-61	227.00
IUUC-Oni-082448	Oryza nivara	42.05	3.00e-63	234.00
IUUC-Opu-083787	Oryza punctata	42.36	1.00e-74	272.00
IUUC-Oru-085278	Oryza rufipogon	41.78	5.00e-61	227.00
IUUC-Ppa-095960	Physcomitrella patens	36.49	4.00e-62	231.00
IUUC-Pop-099510	Populus trichocarpa	64.23	3.00e-132	463.00
IUUC-Ppe-102088	Prunus persica	60.50	1.00e-124	438.00
IUUC-Smo-109171	Selaginella moellendorffii	31.67	3.00e-57	214.00
IUUC-Stu-112915	Solanum tuberosum	89.46	0.00e+00	687.00
IUUC-Tca-120952	Theobroma cacao	62.98	6.00e-137	479.00
IUUC-Tae-122908	Triticum aestivum	42.27	3.00e-69	254.00
IUUC-Vvi-131711	Vitis vinifera	59.88	1.00e-118	419.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence