iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110134

Ensembl Protein ID

Si017223m

UniProt Accession

K3YSH9; K3YSH9_SETIT

Genbank Protein ID

KQL29944.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003528

Gene Name

LOC101762740; SETIT_017223mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si017223m.g	Si017223m	Si017223m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.40e-31	107.2	20	91

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +vp+ f+CpIsl++Mr Pv l++G+ty+r+sI++wl+sg++tcP t+ pl ++dlvPnltlrrli  w ++ 
   Q: 20   KVPSLFRCPISLDVMRSPVSLCTGVTYERTSIQRWLDSGNTTCPATMLPLPSTDLVPNLTLRRLIALWASTA 91
           589*****************************************************************9986 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MGRREMSGRL SAEYQGLEVK VPSLFRCPIS LDVMRSPVSL CTGVTYERTS IQRWLDSGNT 60
TCPATMLPLP STDLVPNLTL RRLIALWAST AAPASPSSSS PPAPSAVGPT PAAAASELLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAGGCCA CCGCTGCCTA TAATACCAGA CTCCCCCTTT CCCTGCTTTC CTCAACTCTT 60
TCCCTTCAAT TCTTCTCCAT TCTCTCGCCT CCACTTCTCC CTGCATCCAA CGCTATTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sita:101762740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014371	Brachypodium distachyon	67.32	1.00e-114	405.00
IUUC-Bra-016947	Brassica rapa	33.03	8.00e-43	167.00
IUUC-Obr-076848	Oryza brachyantha	77.42	2.00e-64	238.00
IUUC-Ogu-078852	Oryza glumaepatula	72.10	7.00e-127	446.00
IUUC-Oin-079861	Oryza indica	71.46	2.00e-125	441.00
IUUC-Oni-083066	Oryza nivara	71.46	2.00e-125	441.00
IUUC-Oru-085038	Oryza rufipogon	69.29	2.00e-119	422.00
IUUC-Ppe-101597	Prunus persica	35.94	2.00e-43	169.00
IUUC-Sbi-113917	Sorghum bicolor	80.66	4.00e-133	467.00
IUUC-Vvi-131751	Vitis vinifera	39.13	1.00e-68	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence