iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099532

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

EF145021

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s14800	POPTR_0006s14800.1	POPTR_0006s14800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-33	114.3	161	193
UBD/Beta-Prp	3.10e-55	188.6	119	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           v ++a+ +d +++++Gs Dgti v+D+ + + l
   Q: 161  VLSVAWsPDgKRVACGSMDGTISVFDVARAKFL 193
           789****999****************9877655 PP

UBD/Beta-Prp

   S: 26   atgsrdgtikvwdvttgkllrslsgheae.............vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
           ++g+ ++++++wd++++kl+++ls   +e             v +v +spdgk  + gs D+ti v+d+   k +h+l+gh   v+sl +s
   Q: 119  VAGGGSASVQLWDTEKWKLIATLSIPRQEgpkptdknsskkfVLSVAWSPDGKRVACGSMDGTISVFDVARAKFLHHLEGHFMPVRSLVYS 209
           567789*****************988888899*********************************************************** PP
   S: 104  psg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng. 192
           p +  +l s+s+d  ++++d e ++ +   lsgh ++v +v  +pdg  +++Gs D+tvrlWdl +   ++t++  h d+v  ++f++ g 
   Q: 210  PADpRVLFSASDDAHVHMYDAEGKSMIA-ALSGHASWVLSVDASPDGAAIATGSSDKTVRLWDLGMRAAVQTMSN-HVDQVWGVTFRPPGg 298
           *66699*********************9.********************************************97.************99* PP
   S: 193  .....kelvsgsldgtvklwdl 209
                 +l+s+s+d+++ l+d+
   Q: 299  pgpraGRLASVSDDKSLSLYDY 320
           *********************8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKLAGLKSIE NAHDESVWAA TWIPATETRP ALLMTGSLDE TVKLWKPDEL TLERTNTGHC 60
LGVVSVAAHP SGSIAASASL DSFVRVFDVD SNASIATLEA PPSEVWQMKF DPKGTTLAVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGAAAAATT ATCACCATCC CAAAACTTGC AAAGAAACCC TCACTTCACG ACTAGGGTTC 60
ATCTCAGCTC CTCTCCAAAC AGAAAGGAAA ATGAAACTAG CAGGTCTAAA ATCAATAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR001480--Bulb-type_lectin_dom
IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	62.25	9.00e-108	382.00
IUUC-Aml-002245	Ailuropoda melanoleuca	39.42	1.00e-55	209.00
IUUC-Atr-003142	Amborella trichopoda	74.41	1.00e-85	308.00
IUUC-Apl-003179	Anas platyrhynchos	40.06	3.00e-60	224.00
IUUC-Aca-004880	Anolis carolinensis	39.42	1.00e-62	232.00
IUUC-Aly-005956	Arabidopsis lyrata	79.75	6.00e-146	509.00
IUUC-Ath-007230	Arabidopsis thaliana	80.06	3.00e-137	480.00
IUUC-Ame-011511	Astyanax mexicanus	39.49	1.00e-57	216.00
IUUC-Bgr-012189	Blumeria graminis	26.91	5.00e-20	91.30
IUUC-Bta-012936	Bos taurus	39.42	7.00e-56	210.00
IUUC-Bdi-015020	Brachypodium distachyon	70.90	4.00e-107	380.00
IUUC-Bol-016345	Brassica oleracea	80.69	1.00e-146	511.00
IUUC-Bra-017323	Brassica rapa	80.37	5.00e-146	509.00
IUUC-Cja-019961	Callithrix jacchus	39.42	9.00e-56	209.00
IUUC-Cfa-020862	Canis familiaris	39.74	5.00e-56	210.00
IUUC-Cpo-021356	Cavia porcellus	39.42	8.00e-56	209.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	44.41	7.00e-58	216.00
IUUC-Csa-024067	Chlorocebus sabaeus	39.42	1.00e-55	209.00
IUUC-Cho-024421	Choloepus hoffmanni	31.02	1.00e-19	88.60
IUUC-Cin-025261	Ciona intestinalis	40.06	2.00e-61	228.00
IUUC-Dre-027706	Danio rerio	30.77	3.00e-36	144.00
IUUC-Dno-029084	Dasypus novemcinctus	39.49	2.00e-54	205.00
IUUC-Dor-030353	Dipodomys ordii	35.38	2.00e-45	175.00
IUUC-Dse-031348	Dothistroma septosporum	25.09	3.00e-21	95.50
IUUC-Dme-031836	Drosophila melanogaster	38.64	3.00e-56	211.00
IUUC-Ete-032261	Echinops telfairi	39.35	2.00e-55	208.00
IUUC-Eca-034231	Equus caballus	35.53	8.00e-46	176.00
IUUC-Eeu-034828	Erinaceus europaeus	38.83	5.00e-52	197.00
IUUC-Fca-036569	Felis catus	39.42	1.00e-55	209.00
IUUC-Fal-037469	Ficedula albicollis	39.74	2.00e-59	221.00
IUUC-Fox-038047	Fusarium oxysporum	28.04	5.00e-22	97.80
IUUC-Gmo-039579	Gadus morhua	40.38	6.00e-59	220.00
IUUC-Gga-040808	Gallus gallus	39.42	4.00e-58	217.00
IUUC-Gac-042100	Gasterosteus aculeatus	41.03	7.00e-61	226.00
IUUC-Gma-044408	Glycine max	82.24	8.00e-153	532.00
IUUC-Ggo-045227	Gorilla gorilla	39.42	9.00e-56	209.00
IUUC-Hsa-045839	Homo sapiens	39.42	9.00e-56	209.00
IUUC-Hvu-047591	Hordeum vulgare	67.18	1.00e-110	392.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	39.42	1.00e-55	209.00
IUUC-Lch-049549	Latimeria chalumnae	36.86	3.00e-54	204.00
IUUC-Lpe-050746	Leersia perrieri	70.77	4.00e-111	394.00
IUUC-Loc-052540	Lepisosteus oculatus	39.42	1.00e-54	205.00
IUUC-Laf-053907	Loxodonta africana	39.42	1.00e-55	209.00
IUUC-Mcc-055828	Macaca mulatta	37.05	2.00e-52	198.00
IUUC-Meu-056075	Macropus eugenii	39.78	7.00e-51	192.00
IUUC-Mtr-057728	Medicago truncatula	83.49	1.00e-140	492.00
IUUC-Mga-059872	Meleagris gallopavo	39.74	3.00e-59	221.00
IUUC-Mmr-060985	Microcebus murinus	39.03	1.00e-54	205.00
IUUC-Mdo-062758	Monodelphis domestica	39.42	3.00e-59	221.00
IUUC-Mmu-063580	Mus musculus	38.78	3.00e-55	207.00
IUUC-Mac-064880	Musa acuminata	78.26	6.00e-144	502.00
IUUC-Mpu-066577	Mustela putorius furo	39.42	4.00e-55	207.00
IUUC-Nle-069573	Nomascus leucogenys	39.42	9.00e-56	209.00
IUUC-Opr-070216	Ochotona princeps	39.74	9.00e-56	209.00
IUUC-Ont-071981	Oreochromis niloticus	39.74	8.00e-59	219.00
IUUC-Oan-073223	Ornithorhynchus anatinus	41.06	2.00e-41	161.00
IUUC-Ocu-074199	Oryctolagus cuniculus	38.11	5.00e-48	184.00
IUUC-Oba-075255	Oryza barthii	64.17	1.00e-94	338.00
IUUC-Obr-076168	Oryza brachyantha	72.64	5.00e-78	283.00
IUUC-Ogl-077777	Oryza glaberrima	70.99	8.00e-111	392.00
IUUC-Ogu-078780	Oryza glumaepatula	70.99	8.00e-111	392.00
IUUC-Oin-079228	Oryza indica	70.99	7.00e-114	402.00
IUUC-Olo-080617	Oryza longistaminata	75.69	1.00e-56	211.00
IUUC-Ome-081421	Oryza meridionalis	69.75	2.00e-110	391.00
IUUC-Oni-082997	Oryza nivara	70.99	7.00e-114	402.00
IUUC-Opu-083931	Oryza punctata	71.21	5.00e-113	400.00
IUUC-Oru-084645	Oryza rufipogon	70.99	8.00e-111	392.00
IUUC-Osa-085842	Oryza sativa	70.99	7.00e-114	402.00
IUUC-Ola-086696	Oryzias latipes	39.74	4.00e-56	211.00
IUUC-Olu-087643	Ostreococcus lucimarinus	48.67	9.00e-54	202.00
IUUC-Oga-088272	Otolemur garnettii	39.74	4.00e-56	210.00
IUUC-Oar-089416	Ovis aries	39.42	7.00e-56	210.00
IUUC-Ptr-090944	Pan troglodytes	39.42	9.00e-56	209.00
IUUC-Pan-091861	Papio anubis	39.42	9.00e-56	209.00
IUUC-Psi-093750	Pelodiscus sinensis	39.10	7.00e-58	216.00
IUUC-Pma-094608	Petromyzon marinus	38.49	5.00e-52	197.00
IUUC-Ppa-095737	Physcomitrella patens	65.74	5.00e-123	433.00
IUUC-Pfo-096479	Poecilia formosa	39.42	2.00e-54	205.00
IUUC-Pab-098179	Pongo abelii	39.42	9.00e-56	209.00
IUUC-Pca-100664	Procavia capensis	32.64	1.00e-25	109.00
IUUC-Ppe-102056	Prunus persica	78.50	3.00e-148	516.00
IUUC-Pva-102859	Pteropus vampyrus	39.10	1.00e-54	206.00
IUUC-Rno-105826	Rattus norvegicus	38.78	4.00e-55	207.00
IUUC-Sha-106660	Sarcophilus harrisii	39.42	3.00e-55	207.00
IUUC-Smo-109234	Selaginella moellendorffii	60.44	2.00e-105	374.00
IUUC-Sit-110048	Setaria italica	69.97	7.00e-105	372.00
IUUC-Sly-111618	Solanum lycopersicum	69.97	8.00e-127	446.00
IUUC-Stu-112543	Solanum tuberosum	70.59	5.00e-131	459.00
IUUC-Sar-113743	Sorex araneus	38.74	2.00e-39	155.00
IUUC-Sbi-114309	Sorghum bicolor	69.04	6.00e-104	369.00
IUUC-Ssc-115560	Sus scrofa	37.18	6.00e-50	190.00
IUUC-Tgu-117300	Taeniopygia guttata	39.42	7.00e-59	219.00
IUUC-Tru-117933	Takifugu rubripes	39.74	2.00e-59	221.00
IUUC-Tsy-119574	Tarsius syrichta	33.65	1.00e-38	152.00
IUUC-Tni-120191	Tetraodon nigroviridis	38.04	4.00e-42	164.00
IUUC-Tca-120983	Theobroma cacao	81.68	2.00e-145	507.00
IUUC-Tae-124056	Triticum aestivum	69.04	2.00e-109	388.00
IUUC-Tur-126711	Triticum urartu	66.98	1.00e-105	375.00
IUUC-Tme-127066	Tuber melanosporum	27.52	8.00e-24	103.00
IUUC-Tbe-127802	Tupaia belangeri	39.42	1.00e-55	209.00
IUUC-Vpa-130618	Vicugna pacos	39.75	1.00e-47	182.00
IUUC-Vvi-130981	Vitis vinifera	85.36	3.00e-155	540.00
IUUC-Xtr-132460	Xenopus tropicalis	40.38	1.00e-57	216.00
IUUC-Xma-134154	Xiphophorus maculatus	39.42	1.00e-54	205.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence