iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016382

Ensembl Protein ID

Bo3g023510.1

UniProt Accession

A0A0D3B3X2; A0A0D3B3X2_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g023510	Bo3g023510.1	Bo3g023510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-27	94.8	202	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  v+++a+ s+ + l +Gs Dgti+vWD  +g ++
   Q: 202  GHEKLVSGIALpSGsDKLYTGSKDGTIRVWDCASGQCT 239
           899********966799****************99997 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

RDCCLILSLC YFCPLQRKDP KLINTNPLSV SLQFFVSNQK NPSFDSIRDR TLGPMDFDSN 60
GGNKRVFNRL GGPTRPSPQQ TNTRQQVCFH WRAGRCYRNP CQFLHRELPA GPVPNHANKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCGACTGCT GTCTCATTCT CTCTCTCTGC TACTTCTGTC CGCTCCAAAG AAAAGATCCG 60
AAGCTTATAA ACACAAATCC ACTTTCAGTT TCTCTTCAAT TTTTTGTCTC AAATCAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	41.41	1.00e-67	249.00
IUUC-Atr-002831	Amborella trichopoda	55.30	3.00e-143	501.00
IUUC-Aly-005699	Arabidopsis lyrata	81.55	0.00e+00	715.00
IUUC-Ath-007001	Arabidopsis thaliana	82.15	0.00e+00	722.00
IUUC-Bdi-014857	Brachypodium distachyon	59.67	8.00e-149	519.00
IUUC-Bra-017351	Brassica rapa	95.12	0.00e+00	813.00
IUUC-Gma-044355	Glycine max	65.03	4.00e-158	550.00
IUUC-Lpe-051596	Leersia perrieri	50.12	3.00e-119	421.00
IUUC-Mtr-058068	Medicago truncatula	63.36	1.00e-149	522.00
IUUC-Mac-065071	Musa acuminata	58.81	2.00e-151	528.00
IUUC-Oba-075769	Oryza barthii	50.35	1.00e-119	422.00
IUUC-Obr-076011	Oryza brachyantha	57.97	3.00e-148	518.00
IUUC-Ogu-078248	Oryza glumaepatula	51.72	2.00e-122	432.00
IUUC-Oin-079981	Oryza indica	57.47	4.00e-148	517.00
IUUC-Olo-080571	Oryza longistaminata	49.40	4.00e-112	397.00
IUUC-Ome-081598	Oryza meridionalis	50.80	2.00e-121	428.00
IUUC-Oni-082711	Oryza nivara	51.03	7.00e-122	430.00
IUUC-Opu-083451	Oryza punctata	55.24	2.00e-144	504.00
IUUC-Oru-085129	Oryza rufipogon	50.81	2.00e-119	422.00
IUUC-Pop-099244	Populus trichocarpa	63.82	5.00e-164	570.00
IUUC-Ppe-101609	Prunus persica	70.05	2.00e-179	621.00
IUUC-Smo-109306	Selaginella moellendorffii	54.26	2.00e-97	348.00
IUUC-Sit-109731	Setaria italica	57.67	7.00e-139	486.00
IUUC-Sly-111514	Solanum lycopersicum	61.87	4.00e-152	530.00
IUUC-Stu-112646	Solanum tuberosum	62.73	1.00e-157	549.00
IUUC-Sbi-114748	Sorghum bicolor	57.64	1.00e-143	502.00
IUUC-Tca-121658	Theobroma cacao	65.19	2.00e-165	575.00
IUUC-Tae-125577	Triticum aestivum	57.64	1.00e-146	512.00
IUUC-Vvi-131444	Vitis vinifera	64.38	7.00e-170	589.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence