iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120949

Ensembl Protein ID

EOY23245

UniProt Accession

A0A061G0A3; A0A061G0A3_THECC

Genbank Protein ID

EOY23245.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM001881

Gene Name

TCM_015205

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_015205	EOY23245	EOY23245

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/APC_C/CDC20	4.70e-125	417.8	128	433
E3 adaptor/Cullin RING/DCX/DWD	3.90e-25	87.8	312	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl.tghsarvg 100
           e+ ldap+l ddfylnLldW+s+nvla+aLg++vylw+a++++ s+l  + +e+  vtsvsw ++g ++a+G +++ev+++D ++++++rtl   h +rvg
   Q: 128  ERTLDAPDLVDDFYLNLLDWGSSNVLAIALGNTVYLWDASDSSTSELVTVdDENGPVTSVSWAPDGRHIAIGLNNSEVQLWDSASNRQLRTLrGCHRSRVG 228
           689**********************************************9889999************************************55699**** PP
   S: 101  aLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse...P...lkkfkehkaavkaiawsPwqkslL 195
           +L+Wn+++l++G+ dg+i+ +dvr++ + ++t+++h+qevCGlkw+ ++++LasGGnDn v++wd s  +   P   l++ ++h++avka+aw+P+q++lL
   Q: 229  SLAWNNHILTTGGIDGQIVNNDVRIRSHVVETYRGHQQEVCGLKWSASGQQLASGGNDNLVHIWDRSMASsnsPtqwLHRLEDHTSAVKALAWCPFQSNLL 329
           *****************************************************************87655556622256778******************* PP
   S: 196  asGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfwkl 296
           a+GGG  Dr+ikfwnt tga+l+++dtgsqvc llw k+++el+s+hGf++n+++lwkyps+ k+ael+gh++Rvl++a spdg ++++aagDetlrfw++
   Q: 330  ATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCALLWNKNERELLSSHGFTQNQLVLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 430
           ***************************************************************************************************** PP
   S: 297  fdk 299
           f  
   Q: 431  FGV 433
           975 PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGs..dDgtikvWDlrtgvll 36
           Ht+ v +la+   +++ll++G+  +D tik W+++tg +l
   Q: 312  HTSAVKALAWcpfQSNLLATGGggGDRTIKFWNTHTGACL 351
           ************8559****5555*************997 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDAGSLNSFS NLKGQSRCPL QEQLLQRRNS KENMDRFIPN RSAMDFDYAH YMLTEGRKVK 60
ENQTVCSPAR EAYRKQLAET LNMNRTRILA FKNKPPTPVE LFPSEHSTSS VHPTKSAKPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTCAATCA GCTCTCGCTC TCTAACAAGG CTTCTTTCTC TCGCACTAAT TTTCTGTTTC 60
TAACGTTTTT CTATTTGATT TTATTTTGTT AATTTTTTTT TTTGTATTGT TATGATTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

tcc:TCM_015205

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000638	Aegilops tauschii	75.33	0.00e+00	691.00
IUUC-Aml-001545	Ailuropoda melanoleuca	46.14	6.00e-103	367.00
IUUC-Atr-002792	Amborella trichopoda	70.43	0.00e+00	635.00
IUUC-Apl-003255	Anas platyrhynchos	47.47	4.00e-109	387.00
IUUC-Aca-004920	Anolis carolinensis	47.10	3.00e-103	368.00
IUUC-Aly-006253	Arabidopsis lyrata	82.28	0.00e+00	786.00
IUUC-Ath-006795	Arabidopsis thaliana	82.28	0.00e+00	787.00
IUUC-Bta-012625	Bos taurus	46.27	2.00e-103	368.00
IUUC-Bdi-014344	Brachypodium distachyon	73.11	0.00e+00	692.00
IUUC-Bol-015368	Brassica oleracea	84.75	0.00e+00	803.00
IUUC-Bra-016738	Brassica rapa	82.53	0.00e+00	787.00
IUUC-Cja-019132	Callithrix jacchus	46.99	4.00e-105	374.00
IUUC-Cfa-020780	Canis familiaris	46.14	2.00e-103	368.00
IUUC-Cpo-022223	Cavia porcellus	46.51	5.00e-94	337.00
IUUC-Cre-022701	Chlamydomonas reinhardtii	52.52	3.00e-120	424.00
IUUC-Csa-023666	Chlorocebus sabaeus	46.75	2.00e-104	371.00
IUUC-Cho-024920	Choloepus hoffmanni	64.86	1.00e-42	166.00
IUUC-Cin-025675	Ciona intestinalis	50.37	9.00e-111	393.00
IUUC-Csv-026019	Ciona savignyi	48.68	7.00e-101	360.00
IUUC-Dre-028026	Danio rerio	43.84	4.00e-104	370.00
IUUC-Dno-028865	Dasypus novemcinctus	45.41	5.00e-101	360.00
IUUC-Dor-030958	Dipodomys ordii	46.00	1.00e-97	349.00
IUUC-Dse-031391	Dothistroma septosporum	48.24	2.00e-94	339.00
IUUC-Dme-031905	Drosophila melanogaster	45.62	4.00e-109	387.00
IUUC-Ete-032387	Echinops telfairi	42.27	1.00e-92	333.00
IUUC-Eeu-035059	Erinaceus europaeus	40.96	2.00e-85	308.00
IUUC-Fca-036346	Felis catus	44.50	6.00e-90	323.00
IUUC-Fal-037558	Ficedula albicollis	45.78	3.00e-105	374.00
IUUC-Gmo-039284	Gadus morhua	44.66	5.00e-101	360.00
IUUC-Gga-040790	Gallus gallus	46.40	2.00e-108	385.00
IUUC-Gac-041431	Gasterosteus aculeatus	42.96	7.00e-95	340.00
IUUC-Gma-043985	Glycine max	83.33	0.00e+00	747.00
IUUC-Ggo-045052	Gorilla gorilla	46.51	3.00e-104	371.00
IUUC-Hsa-046305	Homo sapiens	46.51	3.00e-104	371.00
IUUC-Hvu-047565	Hordeum vulgare	78.07	0.00e+00	677.00
IUUC-Itr-048461	Ictidomys tridecemlineatus	46.51	7.00e-95	340.00
IUUC-Lpe-050954	Leersia perrieri	75.06	0.00e+00	635.00
IUUC-Loc-052638	Lepisosteus oculatus	42.34	4.00e-89	321.00
IUUC-Lma-052998	Leptosphaeria maculans	45.91	1.00e-93	336.00
IUUC-Laf-053742	Loxodonta africana	46.38	3.00e-103	368.00
IUUC-Mcc-054948	Macaca mulatta	46.75	2.00e-104	371.00
IUUC-Mtr-057725	Medicago truncatula	82.02	0.00e+00	756.00
IUUC-Mga-060102	Meleagris gallopavo	46.40	1.00e-108	385.00
IUUC-Mmr-061615	Microcebus murinus	46.75	2.00e-104	371.00
IUUC-Mmu-063864	Mus musculus	46.15	2.00e-97	348.00
IUUC-Mac-064861	Musa acuminata	79.12	0.00e+00	707.00
IUUC-Mpu-066502	Mustela putorius furo	46.42	2.00e-105	375.00
IUUC-Mlu-067277	Myotis lucifugus	45.54	1.00e-101	362.00
IUUC-Nle-070149	Nomascus leucogenys	46.51	2.00e-102	365.00
IUUC-Ont-071660	Oreochromis niloticus	44.47	8.00e-95	340.00
IUUC-Oan-073677	Ornithorhynchus anatinus	53.09	2.00e-97	348.00
IUUC-Ocu-073797	Oryctolagus cuniculus	46.62	9.00e-104	370.00
IUUC-Oba-075514	Oryza barthii	74.78	0.00e+00	640.00
IUUC-Obr-076018	Oryza brachyantha	72.89	0.00e+00	671.00
IUUC-Ogl-077254	Oryza glaberrima	75.00	0.00e+00	642.00
IUUC-Ogu-078562	Oryza glumaepatula	74.78	0.00e+00	641.00
IUUC-Oin-080094	Oryza indica	75.00	0.00e+00	642.00
IUUC-Olo-080449	Oryza longistaminata	73.36	0.00e+00	653.00
IUUC-Ome-081186	Oryza meridionalis	73.16	0.00e+00	674.00
IUUC-Oni-082243	Oryza nivara	75.00	0.00e+00	642.00
IUUC-Opu-084007	Oryza punctata	74.34	0.00e+00	637.00
IUUC-Oru-084357	Oryza rufipogon	74.78	0.00e+00	640.00
IUUC-Osa-086094	Oryza sativa	74.78	0.00e+00	641.00
IUUC-Ola-086907	Oryzias latipes	45.70	4.00e-96	344.00
IUUC-Olu-087647	Ostreococcus lucimarinus	58.61	3.00e-136	477.00
IUUC-Oga-088184	Otolemur garnettii	45.67	1.00e-100	359.00
IUUC-Oar-090023	Ovis aries	46.31	1.00e-99	356.00
IUUC-Ptr-090935	Pan troglodytes	46.02	3.00e-102	364.00
IUUC-Pan-091845	Papio anubis	46.75	2.00e-104	371.00
IUUC-Psi-093188	Pelodiscus sinensis	45.48	3.00e-105	374.00
IUUC-Pma-094187	Petromyzon marinus	44.42	3.00e-97	348.00
IUUC-Pno-094809	Phaeosphaeria nodorum	46.70	5.00e-94	337.00
IUUC-Ppa-095687	Physcomitrella patens	62.13	2.00e-155	541.00
IUUC-Pab-098603	Pongo abelii	46.75	2.00e-104	371.00
IUUC-Pop-099654	Populus trichocarpa	85.40	0.00e+00	805.00
IUUC-Pca-101062	Procavia capensis	46.10	4.00e-104	371.00
IUUC-Ppe-101865	Prunus persica	85.96	0.00e+00	767.00
IUUC-Pva-102925	Pteropus vampyrus	46.51	3.00e-104	371.00
IUUC-Pte-104142	Pyrenophora teres	46.17	4.00e-94	338.00
IUUC-Pyt-104693	Pyrenophora triticirepentis	46.17	4.00e-94	338.00
IUUC-Rno-106005	Rattus norvegicus	46.04	9.00e-98	349.00
IUUC-Sha-107472	Sarcophilus harrisii	46.30	3.00e-100	358.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	45.05	8.00e-91	326.00
IUUC-Spo-108075	Schizosaccharomyces pombe	43.58	5.00e-90	324.00
IUUC-Smo-108922	Selaginella moellendorffii	62.79	3.00e-156	544.00
IUUC-Sit-110032	Setaria italica	74.28	0.00e+00	661.00
IUUC-Sly-111202	Solanum lycopersicum	84.11	0.00e+00	769.00
IUUC-Stu-112676	Solanum tuberosum	83.74	0.00e+00	773.00
IUUC-Sar-113092	Sorex araneus	44.72	1.00e-92	333.00
IUUC-Sbi-114558	Sorghum bicolor	73.78	0.00e+00	665.00
IUUC-Ssc-115710	Sus scrofa	46.51	1.00e-103	369.00
IUUC-Tgu-117100	Taeniopygia guttata	45.78	1.00e-105	375.00
IUUC-Tae-122784	Triticum aestivum	75.11	0.00e+00	694.00
IUUC-Tur-126193	Triticum urartu	75.00	0.00e+00	689.00
IUUC-Tbe-127384	Tupaia belangeri	50.87	4.00e-84	304.00
IUUC-Ttr-128511	Tursiops truncatus	46.14	2.00e-103	369.00
IUUC-Vpa-130775	Vicugna pacos	37.84	2.00e-55	209.00
IUUC-Vvi-131245	Vitis vinifera	84.33	0.00e+00	720.00
IUUC-Xtr-131993	Xenopus tropicalis	48.71	4.00e-110	390.00
IUUC-Xma-133332	Xiphophorus maculatus	45.87	9.00e-101	360.00
IUUC-Zma-135456	Zea mays	71.88	0.00e+00	674.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence