iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081993

Ensembl Protein ID

OMERI03G28270.1

UniProt Accession

A0A0E0D5J6; A0A0E0D5J6_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI03G28270	OMERI03G28270.1	OMERI03G28270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.60e-40	134.3	50	86
UBD/Beta-Prp	7.20e-77	259.5	3	323

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW+++t+++l
   Q: 50   HDGPVRGVHFhaTQPLFVSGGDDYKIKVWNYKTHRCL 86
           99*********6449********************98 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsv 97
           t +++++++++ + f+p +++++++  +g i+ wd+++g+ll ++ +h+++v+ v f+ +++++v+g++D+ ikvw+++t  c+ tl+gh d++
   Q: 3    TKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYI 96
           67889999************************************************************************************** PP
   S: 98   lslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......................... 166
           ++++f+ +  ++vs+s+d+tir+w++++++c+  +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+                         
   Q: 97   RTVQFHHECPWIVSASDDQTIRIWNWQSRTCVA-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIsalrkksvspaddilrltqmntdlf 189
           *********************************.**************************************************7777777777 PP
   S: 167  ..ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
               + + + l+g h++ v++ sf+++ + +vsg++d++vk+w +  ++   v+tl+gh +nv++v f+ +++++vs s+D+siriWd ++++ 
   Q: 190  ggVDAVVKYVLEG-HDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAweVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTG 282
           6444444444466.********************************777668****************************************** PP
   S: 257  lktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkknep 299
           ++t+ +++++++  ++ +++ n l++g  ds   ++kl++++p
   Q: 283  IQTFRREHDRFWILSA-HPEMNLLAAG-HDSGMIVFKLERERP 323
           ****************.6666655555.689999999988765 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MLTKFETKSN RVKGLSFHPR RPWILASLHS GVIQMWDYRM GTLLDRFDEH DGPVRGVHFH 60
ATQPLFVSGG DDYKIKVWNY KTHRCLFTLH GHLDYIRTVQ FHHECPWIVS ASDDQTIRIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTGACCA AGTTCGAGAC GAAGAGCAAC CGGGTGAAGG GGCTGAGCTT CCACCCGCGG 60
CGGCCATGGA TCCTGGCCAG CCTCCACAGC GGGGTGATCC AGATGTGGGA CTACCGCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0853--WD repeat

Interpro

IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002493	Amborella trichopoda	85.00	0.00e+00	1361.00
IUUC-Aly-006020	Arabidopsis lyrata	83.95	0.00e+00	1356.00
IUUC-Ath-007058	Arabidopsis thaliana	84.08	0.00e+00	1360.00
IUUC-Acl-008027	Aspergillus clavatus	57.28	0.00e+00	928.00
IUUC-Afl-008644	Aspergillus flavus	57.68	0.00e+00	926.00
IUUC-Afu-008964	Aspergillus fumigatus	57.16	0.00e+00	929.00
IUUC-Ani-009379	Aspergillus nidulans	57.83	0.00e+00	936.00
IUUC-Ang-009756	Aspergillus niger	57.54	0.00e+00	934.00
IUUC-Aor-010174	Aspergillus oryzae	57.68	0.00e+00	926.00
IUUC-Ame-011229	Astyanax mexicanus	63.72	0.00e+00	1018.00
IUUC-Bgr-012300	Blumeria graminis	56.09	0.00e+00	850.00
IUUC-Bci-013781	Botrytis cinerea	57.73	0.00e+00	930.00
IUUC-Bra-016978	Brassica rapa	82.89	0.00e+00	1345.00
IUUC-Cel-018115	Caenorhabditis elegans	57.39	0.00e+00	897.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	70.38	0.00e+00	1165.00
IUUC-Cin-025572	Ciona intestinalis	59.68	0.00e+00	967.00
IUUC-Csv-025864	Ciona savignyi	58.73	0.00e+00	922.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	57.96	0.00e+00	937.00
IUUC-Cne-027053	Cryptococcus neoformans	59.61	0.00e+00	988.00
IUUC-Dse-031543	Dothistroma septosporum	56.20	0.00e+00	893.00
IUUC-Dme-031945	Drosophila melanogaster	62.15	0.00e+00	961.00
IUUC-Ete-032873	Echinops telfairi	60.98	0.00e+00	966.00
IUUC-Eca-033773	Equus caballus	64.79	0.00e+00	1034.00
IUUC-Fca-035739	Felis catus	63.75	0.00e+00	1019.00
IUUC-Fal-037263	Ficedula albicollis	59.19	0.00e+00	895.00
IUUC-Fox-037738	Fusarium oxysporum	57.43	0.00e+00	937.00
IUUC-Gmo-039602	Gadus morhua	63.02	0.00e+00	998.00
IUUC-Ggr-039931	Gaeumannomyces graminis	56.12	0.00e+00	919.00
IUUC-Gga-040590	Gallus gallus	64.93	0.00e+00	1039.00
IUUC-Kpa-049256	Komagataella pastoris	54.45	0.00e+00	873.00
IUUC-Lch-049706	Latimeria chalumnae	64.79	0.00e+00	1035.00
IUUC-Loc-051867	Lepisosteus oculatus	52.03	0.00e+00	770.00
IUUC-Lma-053138	Leptosphaeria maculans	57.77	0.00e+00	944.00
IUUC-Meu-056238	Macropus eugenii	56.95	0.00e+00	775.00
IUUC-Mor-057172	Magnaporthe oryzae	56.29	0.00e+00	917.00
IUUC-Mpo-057300	Magnaporthe poae	51.33	0.00e+00	925.00
IUUC-Mla-059019	Melampsora laricipopulina	60.78	0.00e+00	1003.00
IUUC-Mga-059499	Meleagris gallopavo	64.75	0.00e+00	1033.00
IUUC-Mvi-060336	Microbotryum violaceum	61.02	0.00e+00	1013.00
IUUC-Mmr-061102	Microcebus murinus	64.15	0.00e+00	1028.00
IUUC-Mpu-066701	Mustela putorius furo	65.06	0.00e+00	1040.00
IUUC-Mlu-067392	Myotis lucifugus	64.62	0.00e+00	1030.00
IUUC-Nfi-068270	Neosartorya fischeri	57.28	0.00e+00	929.00
IUUC-Ncr-068892	Neurospora crassa	55.94	0.00e+00	937.00
IUUC-Nle-069634	Nomascus leucogenys	65.87	0.00e+00	946.00
IUUC-Ont-072488	Oreochromis niloticus	63.99	0.00e+00	1020.00
IUUC-Obr-076429	Oryza brachyantha	95.53	0.00e+00	1530.00
IUUC-Oin-080029	Oryza indica	98.03	0.00e+00	1555.00
IUUC-Olo-080895	Oryza longistaminata	97.89	0.00e+00	1553.00
IUUC-Ola-086921	Oryzias latipes	63.19	0.00e+00	1013.00
IUUC-Olu-087639	Ostreococcus lucimarinus	70.57	0.00e+00	1155.00
IUUC-Psi-093044	Pelodiscus sinensis	57.67	0.00e+00	854.00
IUUC-Pfo-097493	Poecilia formosa	64.52	0.00e+00	1026.00
IUUC-Pca-100413	Procavia capensis	60.25	0.00e+00	688.00
IUUC-Pgr-103376	Puccinia graminis	59.97	0.00e+00	999.00
IUUC-Pte-104126	Pyrenophora teres	57.36	0.00e+00	893.00
IUUC-Sce-106464	Saccharomyces cerevisiae	51.00	0.00e+00	800.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	53.74	0.00e+00	860.00
IUUC-Spo-108217	Schizosaccharomyces pombe	54.45	0.00e+00	879.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	57.49	0.00e+00	925.00
IUUC-Smo-109458	Selaginella moellendorffii	78.17	0.00e+00	1262.00
IUUC-Sit-109697	Setaria italica	94.61	0.00e+00	1518.00
IUUC-Sly-111759	Solanum lycopersicum	84.87	0.00e+00	1394.00
IUUC-Stu-112564	Solanum tuberosum	84.74	0.00e+00	1391.00
IUUC-Sre-115209	Sporisorium reilianum	57.57	0.00e+00	969.00
IUUC-Tsy-119105	Tarsius syrichta	59.66	0.00e+00	939.00
IUUC-Tni-120556	Tetraodon nigroviridis	43.88	2.00e-166	579.00
IUUC-Tca-120918	Theobroma cacao	84.34	0.00e+00	1395.00
IUUC-Tre-121951	Trichoderma reesei	57.33	0.00e+00	934.00
IUUC-Tvi-122359	Trichoderma virens	57.73	0.00e+00	937.00
IUUC-Tbe-127882	Tupaia belangeri	68.71	7.00e-128	451.00
IUUC-Uma-129337	Ustilago maydis	57.87	0.00e+00	969.00
IUUC-Vda-129828	Verticillium dahliae	57.87	0.00e+00	936.00
IUUC-Vvi-130958	Vitis vinifera	83.95	0.00e+00	1374.00
IUUC-Xma-133138	Xiphophorus maculatus	64.52	0.00e+00	1027.00
IUUC-Yli-134399	Yarrowia lipolytica	51.48	0.00e+00	803.00
IUUC-Zma-135253	Zea mays	95.70	0.00e+00	1506.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence