iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016525

Ensembl Protein ID

Bo4g198620.1

UniProt Accession

A0A0D3C6Q1; A0A0D3C6Q1_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g198620	Bo4g198620.1	Bo4g198620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-28	99.4	320	357
UBD/Beta-Prp	4.40e-45	155.6	231	501

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWDlrtg 33
           gHt+ vt++af     s   l+s+sdDgt+++WD r  
   Q: 320  GHTGAVTAIAFsprqaSVYQLLSSSDDGTCRIWDARYS 357
           8**********998743377**************7765 PP

UBD/Beta-Prp

   S: 2    iktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           ik+l+gh+ +v +   f +++++++tgs+d+ +k+w+++t  +l+s  ghe+ +t++  s++  + +++s+D +i+vw l +g ++++l+gh+  v+
   Q: 231  IKKLRGHRNAVYC-AIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVT 326
           5678888887666.999******************************************************************************** PP
   S: 99   slsfsp...sgdklvsGshdrtirvwdletgqclee........................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.. 166
           +++fsp   s + l+s s+d t r+wd +  qcl                           ++ +++ + c +++ +g ++v+Gs D+  r+W+   
   Q: 327  AIAFSPrqaSVYQLLSSSDDGTCRIWDARYSQCLPRiyvpnpldagtgksnfpssnaastSNASKSHQILCCAYNANGTIFVTGSSDSNARVWSAsk 423
           ******986669***********************************************989999999*************************9999 PP
   S: 167  ....ktgkllrtl...tgghtdsvyslsfdsng..........................kelvsgsldgtvklwdlqtg 212
                 ++  ++l   +g h+++v+ ++f+                               +v++s+dg+ ++w  ++ 
   Q: 424  snldDAEQPTHELdvlRG-HENDVNYVQFSGCAvaprsstsetlredsypkfknswfchDNIVTCSRDGSAIIWTPRSR 501
           999966666666677577.*********666666666677788889999999999***9***************87755 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MDWIHKSTPC LDTSSSVPAN VPPLQRQDRL ACHSSPADVD MDLREVYFLI LHFLSNGPCD 60
RTFGHLRDEI LEKGLLPRRY HSWWSRTGTC TACADVDDDG ISLPLSYDNL VERYPHIEKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTGGA TTCACAAATC TACTCCTTGT TTGGACACTT CCAGTTCAGT TCCAGCAAAT 60
GTTCCTCCTC TTCAGCGACA GGATAGACTT GCTTGCCATT CTTCGCCAGC CGATGTAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR010525--Auxin_resp
IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF06507--Auxin_resp
PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0009725--P:response to hormone

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003700	Anas platyrhynchos	29.62	2.00e-63	238.00
IUUC-Aly-006517	Arabidopsis lyrata	85.01	0.00e+00	2493.00
IUUC-Ath-006577	Arabidopsis thaliana	83.71	0.00e+00	2364.00
IUUC-Bdi-014797	Brachypodium distachyon	60.68	0.00e+00	773.00
IUUC-Gga-040798	Gallus gallus	30.58	2.00e-74	275.00
IUUC-Hvu-047706	Hordeum vulgare	75.07	2.00e-139	488.00
IUUC-Mtr-057637	Medicago truncatula	66.63	0.00e+00	1110.00
IUUC-Opr-070971	Ochotona princeps	25.68	1.00e-39	159.00
IUUC-Oin-079669	Oryza indica	67.18	0.00e+00	696.00
IUUC-Olu-087745	Ostreococcus lucimarinus	32.99	5.00e-78	286.00
IUUC-Psi-093271	Pelodiscus sinensis	32.08	8.00e-68	253.00
IUUC-Ppa-095793	Physcomitrella patens	56.56	0.00e+00	840.00
IUUC-Pop-099672	Populus trichocarpa	55.76	0.00e+00	1478.00
IUUC-Ppe-101283	Prunus persica	70.57	0.00e+00	1173.00
IUUC-Sit-110017	Setaria italica	57.03	0.00e+00	792.00
IUUC-Sly-111348	Solanum lycopersicum	67.35	0.00e+00	1077.00
IUUC-Sbi-114195	Sorghum bicolor	71.36	0.00e+00	800.00
IUUC-Tgu-116821	Taeniopygia guttata	30.28	6.00e-74	273.00
IUUC-Tca-121615	Theobroma cacao	71.74	0.00e+00	1179.00
IUUC-Tbe-127663	Tupaia belangeri	33.19	1.00e-30	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence