iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114362

Ensembl Protein ID

Sb01g043410.1

UniProt Accession

C5WTQ5; C5WTQ5_SORBI

Genbank Protein ID

EER92666.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G462600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g043410	Sb01g043410.1	Sb01g043410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-13	51.0	67	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           t+++t++++    ++l++++ D ++ +WD++tg +
   Q: 67   TAPITSVSWsRYgHRLLASATDRSLTLWDVSTGEK 101
           789******844478999999**********9976 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MNVPVVDPYQ GEFPETIEEY LHYGTMKCIA FNRKGTLLAA GCSNGSCIIW DFETRGFIKE 60
FRDKDSTAPI TSVSWSRYGH RLLASATDRS LTLWDVSTGE KIARITLQQT PLRASLQPGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGTGC CTGTAGTCGG TGAGTTCTCG ATTCGTTTCT CGTGTGGATT TTTGTCGTTG 60
GGGGGGTTGG GGACGTGTCT ATTCTCGTAG AATTCTGGAG AAATCTGGTC GGCTGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG

sbi:SORBI_01g043410

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000616	Aegilops tauschii	74.95	0.00e+00	784.00
IUUC-Aml-002118	Ailuropoda melanoleuca	31.40	5.00e-56	211.00
IUUC-Atr-002777	Amborella trichopoda	55.79	2.00e-171	594.00
IUUC-Apl-004056	Anas platyrhynchos	33.33	4.00e-55	208.00
IUUC-Aca-004999	Anolis carolinensis	34.29	4.00e-55	208.00
IUUC-Aly-006092	Arabidopsis lyrata	57.99	1.00e-158	551.00
IUUC-Ath-006947	Arabidopsis thaliana	56.25	1.00e-157	548.00
IUUC-Ago-007753	Ashbya gossypii	28.57	1.00e-30	126.00
IUUC-Acl-008105	Aspergillus clavatus	31.32	9.00e-41	160.00
IUUC-Afl-008633	Aspergillus flavus	30.77	9.00e-39	153.00
IUUC-Afu-009075	Aspergillus fumigatus	33.74	6.00e-20	90.90
IUUC-Ani-009233	Aspergillus nidulans	31.00	3.00e-43	168.00
IUUC-Ang-009695	Aspergillus niger	31.89	4.00e-42	164.00
IUUC-Aor-009988	Aspergillus oryzae	30.77	9.00e-39	153.00
IUUC-Ate-010313	Aspergillus terreus	30.86	7.00e-40	157.00
IUUC-Ame-011134	Astyanax mexicanus	27.50	3.00e-39	155.00
IUUC-Bgr-012302	Blumeria graminis	32.28	8.00e-39	154.00
IUUC-Bta-012946	Bos taurus	31.77	2.00e-57	215.00
IUUC-Bci-013968	Botrytis cinerea	31.55	1.00e-42	166.00
IUUC-Bdi-014387	Brachypodium distachyon	77.02	0.00e+00	782.00
IUUC-Bra-017414	Brassica rapa	57.04	6.00e-161	559.00
IUUC-Cel-018610	Caenorhabditis elegans	29.43	9.00e-46	176.00
IUUC-Cja-019938	Callithrix jacchus	31.64	5.00e-56	211.00
IUUC-Cfa-020726	Canis familiaris	31.60	4.00e-57	214.00
IUUC-Cpo-021560	Cavia porcellus	33.06	2.00e-46	178.00
IUUC-Cre-022588	Chlamydomonas reinhardtii	52.29	5.00e-24	104.00
IUUC-Csa-024192	Chlorocebus sabaeus	31.77	2.00e-57	215.00
IUUC-Cho-024355	Choloepus hoffmanni	33.68	1.00e-56	213.00
IUUC-Cin-025285	Ciona intestinalis	34.03	3.00e-59	222.00
IUUC-Csv-026366	Ciona savignyi	33.16	2.00e-56	212.00
IUUC-Cgl-026450	Colletotrichum gloeosporioides	29.00	2.00e-38	152.00
IUUC-Cne-027092	Cryptococcus neoformans	27.14	2.00e-38	152.00
IUUC-Cme-027137	Cyanidioschyzon merolae	30.87	3.00e-22	99.00
IUUC-Dre-027374	Danio rerio	33.89	8.00e-57	213.00
IUUC-Dno-030003	Dasypus novemcinctus	31.75	2.00e-53	202.00
IUUC-Dor-030355	Dipodomys ordii	31.77	4.00e-57	214.00
IUUC-Dse-031442	Dothistroma septosporum	30.90	7.00e-40	157.00
IUUC-Dme-031932	Drosophila melanogaster	35.32	3.00e-63	234.00
IUUC-Ete-032858	Echinops telfairi	33.66	2.00e-36	146.00
IUUC-Eca-034217	Equus caballus	31.60	9.00e-57	213.00
IUUC-Eeu-035024	Erinaceus europaeus	35.11	7.00e-55	207.00
IUUC-Fca-035370	Felis catus	31.82	3.00e-56	211.00
IUUC-Fal-036628	Ficedula albicollis	34.29	3.00e-54	205.00
IUUC-Fox-037739	Fusarium oxysporum	29.24	2.00e-42	166.00
IUUC-Fso-038094	Fusarium solani	31.12	8.00e-44	170.00
IUUC-Gmo-039088	Gadus morhua	31.47	2.00e-54	206.00
IUUC-Ggr-040063	Gaeumannomyces graminis	31.65	4.00e-44	171.00
IUUC-Gga-041160	Gallus gallus	33.47	3.00e-56	212.00
IUUC-Gac-041333	Gasterosteus aculeatus	34.00	2.00e-54	206.00
IUUC-Gma-043909	Glycine max	61.54	4.00e-173	600.00
IUUC-Ggo-044657	Gorilla gorilla	31.77	2.00e-57	215.00
IUUC-Hsa-045894	Homo sapiens	31.77	2.00e-57	215.00
IUUC-Hvu-047662	Hordeum vulgare	75.36	0.00e+00	805.00
IUUC-Itr-048125	Ictidomys tridecemlineatus	31.72	1.00e-54	206.00
IUUC-Kpa-049095	Komagataella pastoris	28.81	6.00e-34	137.00
IUUC-Lch-049495	Latimeria chalumnae	35.79	1.00e-21	97.10
IUUC-Lpe-051038	Leersia perrieri	76.58	0.00e+00	809.00
IUUC-Loc-052680	Lepisosteus oculatus	31.65	1.00e-58	219.00
IUUC-Laf-053717	Loxodonta africana	31.94	7.00e-56	210.00
IUUC-Mcc-055007	Macaca mulatta	31.97	9.00e-55	207.00
IUUC-Meu-056494	Macropus eugenii	38.18	4.00e-16	78.60
IUUC-Mor-057173	Magnaporthe oryzae	31.75	7.00e-43	167.00
IUUC-Mpo-057622	Magnaporthe poae	31.41	3.00e-44	171.00
IUUC-Mtr-058687	Medicago truncatula	57.80	1.00e-178	618.00
IUUC-Mla-059057	Melampsora laricipopulina	27.18	1.00e-29	123.00
IUUC-Mga-060037	Meleagris gallopavo	33.40	1.00e-53	203.00
IUUC-Mvi-060321	Microbotryum violaceum	30.66	6.00e-41	160.00
IUUC-Mmr-060755	Microcebus murinus	31.94	7.00e-56	210.00
IUUC-Mdo-061859	Monodelphis domestica	33.47	3.00e-56	212.00
IUUC-Mmu-063755	Mus musculus	31.94	1.00e-57	216.00
IUUC-Mac-065292	Musa acuminata	65.83	0.00e+00	722.00
IUUC-Mpu-065896	Mustela putorius furo	31.87	8.00e-57	213.00
IUUC-Mlu-067927	Myotis lucifugus	31.82	4.00e-56	211.00
IUUC-Nfi-068429	Neosartorya fischeri	31.09	7.00e-40	157.00
IUUC-Ncr-068738	Neurospora crassa	32.69	1.00e-44	172.00
IUUC-Nle-069608	Nomascus leucogenys	31.77	2.00e-57	215.00
IUUC-Opr-070319	Ochotona princeps	32.19	5.00e-55	207.00
IUUC-Ont-071451	Oreochromis niloticus	31.67	1.00e-57	216.00
IUUC-Oan-073445	Ornithorhynchus anatinus	33.63	1.00e-53	202.00
IUUC-Ocu-074341	Oryctolagus cuniculus	31.77	2.00e-57	215.00
IUUC-Oba-075664	Oryza barthii	77.72	0.00e+00	866.00
IUUC-Obr-076630	Oryza brachyantha	77.46	0.00e+00	830.00
IUUC-Ogl-077847	Oryza glaberrima	77.45	0.00e+00	861.00
IUUC-Ogu-077970	Oryza glumaepatula	77.43	0.00e+00	820.00
IUUC-Oin-079374	Oryza indica	77.72	0.00e+00	865.00
IUUC-Olo-080992	Oryza longistaminata	77.72	0.00e+00	867.00
IUUC-Ome-081683	Oryza meridionalis	77.99	0.00e+00	820.00
IUUC-Oni-082594	Oryza nivara	77.72	0.00e+00	865.00
IUUC-Opu-083907	Oryza punctata	78.35	0.00e+00	885.00
IUUC-Oru-084400	Oryza rufipogon	77.72	0.00e+00	865.00
IUUC-Osa-085442	Oryza sativa	77.72	0.00e+00	865.00
IUUC-Ola-086569	Oryzias latipes	32.90	6.00e-57	214.00
IUUC-Oga-088947	Otolemur garnettii	31.23	8.00e-53	200.00
IUUC-Oar-090358	Ovis aries	31.23	7.00e-56	210.00
IUUC-Ptr-091601	Pan troglodytes	31.77	2.00e-57	216.00
IUUC-Pan-092466	Papio anubis	31.77	2.00e-57	215.00
IUUC-Psi-093614	Pelodiscus sinensis	33.05	5.00e-55	207.00
IUUC-Pma-094450	Petromyzon marinus	34.65	2.00e-52	199.00
IUUC-Pno-094819	Phaeosphaeria nodorum	28.83	7.00e-36	144.00
IUUC-Ppa-095157	Physcomitrella patens	58.22	4.00e-69	253.00
IUUC-Pfo-096312	Poecilia formosa	34.32	4.00e-57	214.00
IUUC-Pab-098058	Pongo abelii	31.77	2.00e-57	215.00
IUUC-Pop-099039	Populus trichocarpa	61.03	0.00e+00	629.00
IUUC-Pca-100623	Procavia capensis	34.53	7.00e-55	207.00
IUUC-Ppe-102053	Prunus persica	62.31	0.00e+00	636.00
IUUC-Pva-102779	Pteropus vampyrus	34.02	3.00e-53	202.00
IUUC-Pgr-103398	Puccinia graminis	29.22	2.00e-35	142.00
IUUC-Ptt-103912	Puccinia triticina	29.75	3.00e-36	145.00
IUUC-Pte-104246	Pyrenophora teres	28.68	2.00e-38	152.00
IUUC-Pyt-104582	Pyrenophora triticirepentis	28.49	3.00e-38	152.00
IUUC-Rno-104838	Rattus norvegicus	31.77	3.00e-57	215.00
IUUC-Sce-106229	Saccharomyces cerevisiae	29.88	2.00e-29	122.00
IUUC-Sha-106527	Sarcophilus harrisii	33.47	3.00e-56	212.00
IUUC-Sja-107862	Schizosaccharomyces japonicus	30.71	3.00e-44	171.00
IUUC-Spo-108025	Schizosaccharomyces pombe	32.85	1.00e-43	169.00
IUUC-Ssl-108544	Sclerotinia sclerotiorum	31.32	1.00e-41	163.00
IUUC-Smo-109474	Selaginella moellendorffii	47.42	2.00e-111	395.00
IUUC-Sit-110687	Setaria italica	89.17	0.00e+00	916.00
IUUC-Sly-111597	Solanum lycopersicum	59.89	4.00e-172	596.00
IUUC-Stu-112389	Solanum tuberosum	60.34	6.00e-176	609.00
IUUC-Sar-113284	Sorex araneus	36.02	3.00e-33	135.00
IUUC-Sre-115146	Sporisorium reilianum	24.36	1.00e-29	123.00
IUUC-Ssc-115604	Sus scrofa	31.40	5.00e-56	211.00
IUUC-Tru-118258	Takifugu rubripes	34.11	6.00e-57	214.00
IUUC-Tsy-119169	Tarsius syrichta	34.31	9.00e-46	177.00
IUUC-Tni-119939	Tetraodon nigroviridis	34.32	2.00e-56	212.00
IUUC-Tca-121010	Theobroma cacao	60.04	0.00e+00	635.00
IUUC-Tre-121944	Trichoderma reesei	32.28	1.00e-42	166.00
IUUC-Tvi-122283	Trichoderma virens	32.94	2.00e-45	176.00
IUUC-Tur-126395	Triticum urartu	75.09	0.00e+00	805.00
IUUC-Tme-127150	Tuber melanosporum	30.73	1.00e-43	170.00
IUUC-Tbe-127745	Tupaia belangeri	33.02	7.00e-27	114.00
IUUC-Ttr-129187	Tursiops truncatus	35.11	8.00e-55	207.00
IUUC-Uma-129654	Ustilago maydis	25.57	1.00e-28	120.00
IUUC-Vda-129788	Verticillium dahliae	31.48	3.00e-44	172.00
IUUC-Vpa-130182	Vicugna pacos	32.14	2.00e-42	166.00
IUUC-Vvi-131557	Vitis vinifera	62.17	0.00e+00	658.00
IUUC-Xtr-132007	Xenopus tropicalis	33.83	2.00e-57	216.00
IUUC-Xma-133909	Xiphophorus maculatus	32.98	3.00e-57	215.00
IUUC-Yli-134524	Yarrowia lipolytica	30.08	1.00e-41	163.00
IUUC-Zma-134821	Zea mays	95.95	0.00e+00	1021.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence