iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005587

Ensembl Protein ID

Al_scaffold_0006_2327

UniProt Accession

D7M332; D7M332_ARALL

Genbank Protein ID

EFH50448.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_662262

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0006_2327	Al_scaffold_0006_2327	Al_scaffold_0006_2327

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-25	88.6	400	430

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H++ vt+++f   +d++++sGs Dg++++W+
   Q: 400  HSNYVTSVHFnpvDDDHFISGSIDGKVRIWS 430
           99**********766***************8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MESLIEEEEE EETRFFDALE EIASCSSTSL CRIEYDESLS SISGEFRYDV WIKSPGNTEE 60
RREKFLNWMG LSSTVKEDKS GNVNCLSRSV NESAVLMSLK SDDDEFSSCR CDSSVFSPSE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAATCTC TAATTGAAGA AGAAGAAGAA GAAGAAACTC GATTTTTCGA TGCTCTCGAA 60
GAAATCGCAT CTTGTTCAAG TACAAGTCTT TGTAGAATCG AGTACGATGA ATCTCTATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_662262

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000343	Aegilops tauschii	46.72	2.00e-121	429.00
IUUC-Ath-007681	Arabidopsis thaliana	89.61	0.00e+00	1165.00
IUUC-Bol-016331	Brassica oleracea	77.67	0.00e+00	1003.00
IUUC-Bra-017674	Brassica rapa	76.77	0.00e+00	977.00
IUUC-Cre-022638	Chlamydomonas reinhardtii	31.73	4.00e-19	87.80
IUUC-Gma-043517	Glycine max	46.50	4.00e-156	544.00
IUUC-Lpe-051594	Leersia perrieri	45.51	2.00e-98	352.00
IUUC-Mtr-058262	Medicago truncatula	55.19	1.00e-159	556.00
IUUC-Mac-064863	Musa acuminata	42.16	1.00e-141	496.00
IUUC-Oba-075653	Oryza barthii	44.69	2.00e-110	393.00
IUUC-Obr-076256	Oryza brachyantha	47.78	2.00e-117	416.00
IUUC-Ogl-077818	Oryza glaberrima	47.48	2.00e-116	412.00
IUUC-Ogu-078138	Oryza glumaepatula	44.87	1.00e-111	396.00
IUUC-Oin-079480	Oryza indica	47.48	1.00e-116	413.00
IUUC-Olo-080838	Oryza longistaminata	47.67	1.00e-117	416.00
IUUC-Ome-081177	Oryza meridionalis	47.67	8.00e-128	450.00
IUUC-Oni-082466	Oryza nivara	47.48	1.00e-116	413.00
IUUC-Oru-084265	Oryza rufipogon	44.87	1.00e-111	396.00
IUUC-Osa-085283	Oryza sativa	47.48	1.00e-116	413.00
IUUC-Pop-100091	Populus trichocarpa	49.87	1.00e-178	619.00
IUUC-Ppe-101700	Prunus persica	53.12	0.00e+00	671.00
IUUC-Sit-110689	Setaria italica	49.42	6.00e-120	424.00
IUUC-Sly-111626	Solanum lycopersicum	46.76	6.00e-161	560.00
IUUC-Stu-112511	Solanum tuberosum	46.95	1.00e-168	586.00
IUUC-Tca-121772	Theobroma cacao	57.61	1.00e-173	602.00
IUUC-Tae-122988	Triticum aestivum	46.73	3.00e-122	431.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence