iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131565

Ensembl Protein ID

VIT_18s0001g07170.t01

UniProt Accession

F6H108; F6H108_VITVI

Genbank Protein ID

CCB45630.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595227

Gene Name

VIT_18s0001g07170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_18s0001g07170	VIT_18s0001g07170.t01	VIT_18s0001g07170.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-14	54.6	199	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDl 30
           gH++ ++c +f    sd l++sG++D  ++++ l
   Q: 199  GHSANIFCAKFipetSDELVASGAGDAEVRLFHL 232
           8***********99877*************9865 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MTQHSESPPV FPTKFVWNSQ VPFKVKSFVW LVAHKKLNTN DLLQLRRPHK ALSPNICKLC 60
MKHGETVDHL FLHCSLTKGL WHRLFQLAKM DWVSPRSISD MFFTNFNGFG SSKRGVVLWQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACCCAAC ATTCCGAGTC GCCTCCAGTG TTCCCTACTA AGTTTGTCTG GAATTCTCAA 60
GTCCCTTTCA AAGTCAAGTC CTTTGTCTGG TTGGTGGCGC ACAAGAAGCT TAATACTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR026960--RVT-Znf
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40
PF13966--zf-RVT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000083	Aegilops tauschii	53.80	5.00e-137	480.00
IUUC-Aml-001699	Ailuropoda melanoleuca	29.08	6.00e-35	141.00
IUUC-Atr-002509	Amborella trichopoda	67.15	6.00e-161	559.00
IUUC-Aly-006475	Arabidopsis lyrata	69.35	0.00e+00	945.00
IUUC-Ath-007666	Arabidopsis thaliana	69.40	0.00e+00	943.00
IUUC-Afu-008828	Aspergillus fumigatus	55.00	7.00e-22	99.00
IUUC-Ani-009263	Aspergillus nidulans	55.00	3.00e-22	100.00
IUUC-Ame-010988	Astyanax mexicanus	47.50	8.00e-30	124.00
IUUC-Bdi-014100	Brachypodium distachyon	60.17	0.00e+00	821.00
IUUC-Bol-016409	Brassica oleracea	69.02	0.00e+00	974.00
IUUC-Bra-016979	Brassica rapa	68.63	0.00e+00	969.00
IUUC-Cel-018561	Caenorhabditis elegans	40.00	1.00e-19	90.10
IUUC-Cfa-020200	Canis familiaris	29.08	8.00e-35	141.00
IUUC-Cpo-021739	Cavia porcellus	28.67	2.00e-34	140.00
IUUC-Csa-023648	Chlorocebus sabaeus	29.08	5.00e-35	141.00
IUUC-Csv-026289	Ciona savignyi	27.51	1.00e-29	123.00
IUUC-Dno-029403	Dasypus novemcinctus	29.08	4.00e-35	142.00
IUUC-Dor-030332	Dipodomys ordii	52.81	8.00e-27	114.00
IUUC-Dme-031811	Drosophila melanogaster	31.50	6.00e-41	161.00
IUUC-Ete-032331	Echinops telfairi	42.86	4.00e-18	85.90
IUUC-Eca-033783	Equus caballus	29.08	5.00e-35	141.00
IUUC-Fca-036543	Felis catus	29.08	6.00e-35	141.00
IUUC-Gac-041297	Gasterosteus aculeatus	27.35	2.00e-33	136.00
IUUC-Gma-043128	Glycine max	73.13	0.00e+00	985.00
IUUC-Ggo-045309	Gorilla gorilla	29.08	5.00e-35	141.00
IUUC-Hsa-046622	Homo sapiens	29.08	5.00e-35	141.00
IUUC-Itr-049052	Ictidomys tridecemlineatus	29.20	5.00e-34	138.00
IUUC-Lch-049810	Latimeria chalumnae	27.48	3.00e-34	139.00
IUUC-Lpe-051600	Leersia perrieri	59.82	0.00e+00	782.00
IUUC-Lma-053032	Leptosphaeria maculans	38.93	5.00e-23	102.00
IUUC-Laf-054097	Loxodonta africana	29.08	6.00e-35	141.00
IUUC-Mcc-054848	Macaca mulatta	29.08	5.00e-35	141.00
IUUC-Mtr-057735	Medicago truncatula	73.16	0.00e+00	966.00
IUUC-Mmr-060709	Microcebus murinus	28.84	1.00e-34	140.00
IUUC-Mdo-062401	Monodelphis domestica	28.91	3.00e-34	139.00
IUUC-Mac-064840	Musa acuminata	67.97	0.00e+00	911.00
IUUC-Mpu-066268	Mustela putorius furo	29.08	5.00e-35	141.00
IUUC-Nfi-068606	Neosartorya fischeri	55.00	4.00e-22	100.00
IUUC-Opr-071008	Ochotona princeps	28.02	7.00e-36	144.00
IUUC-Ocu-074166	Oryctolagus cuniculus	28.07	2.00e-35	143.00
IUUC-Oba-075298	Oryza barthii	60.03	0.00e+00	784.00
IUUC-Obr-076849	Oryza brachyantha	60.96	0.00e+00	787.00
IUUC-Ogl-077515	Oryza glaberrima	60.15	0.00e+00	781.00
IUUC-Ogu-077968	Oryza glumaepatula	59.73	0.00e+00	780.00
IUUC-Oin-079231	Oryza indica	59.76	0.00e+00	699.00
IUUC-Olo-081045	Oryza longistaminata	60.81	0.00e+00	840.00
IUUC-Ome-081395	Oryza meridionalis	60.38	0.00e+00	823.00
IUUC-Oni-082801	Oryza nivara	59.88	0.00e+00	782.00
IUUC-Opu-083585	Oryza punctata	59.01	0.00e+00	809.00
IUUC-Oru-085163	Oryza rufipogon	59.88	0.00e+00	780.00
IUUC-Osa-085550	Oryza sativa	74.13	1.00e-90	325.00
IUUC-Oga-088095	Otolemur garnettii	27.68	4.00e-35	142.00
IUUC-Oar-090285	Ovis aries	29.08	4.00e-35	142.00
IUUC-Ptr-091221	Pan troglodytes	29.08	5.00e-35	141.00
IUUC-Pan-091771	Papio anubis	29.08	5.00e-35	141.00
IUUC-Pno-095149	Phaeosphaeria nodorum	47.56	1.00e-16	81.60
IUUC-Ppa-095373	Physcomitrella patens	53.37	0.00e+00	699.00
IUUC-Pab-098513	Pongo abelii	29.08	5.00e-35	141.00
IUUC-Pop-098837	Populus trichocarpa	78.37	0.00e+00	1090.00
IUUC-Pca-101095	Procavia capensis	27.49	2.00e-30	126.00
IUUC-Ppe-101507	Prunus persica	76.30	0.00e+00	1057.00
IUUC-Pva-102444	Pteropus vampyrus	29.08	5.00e-35	141.00
IUUC-Pte-104187	Pyrenophora teres	37.09	1.00e-21	97.80
IUUC-Pyt-104546	Pyrenophora triticirepentis	42.50	6.00e-22	99.40
IUUC-Smo-108844	Selaginella moellendorffii	49.64	5.00e-180	623.00
IUUC-Sit-110154	Setaria italica	60.38	0.00e+00	835.00
IUUC-Sly-111707	Solanum lycopersicum	74.17	0.00e+00	1019.00
IUUC-Sar-113129	Sorex araneus	27.89	2.00e-27	116.00
IUUC-Sbi-113858	Sorghum bicolor	59.51	0.00e+00	813.00
IUUC-Ssc-116275	Sus scrofa	29.08	6.00e-35	141.00
IUUC-Tni-119887	Tetraodon nigroviridis	26.79	3.00e-34	139.00
IUUC-Tca-121722	Theobroma cacao	77.10	0.00e+00	1074.00
IUUC-Tae-124583	Triticum aestivum	60.72	0.00e+00	824.00
IUUC-Tur-125968	Triticum urartu	54.83	0.00e+00	749.00
IUUC-Tme-126910	Tuber melanosporum	24.92	4.00e-16	79.70
IUUC-Ttr-128390	Tursiops truncatus	29.08	5.00e-35	141.00
IUUC-Uma-129509	Ustilago maydis	29.14	8.00e-19	88.20
IUUC-Xtr-132290	Xenopus tropicalis	29.71	4.00e-33	135.00
IUUC-Zma-135624	Zea mays	58.35	0.00e+00	759.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence