iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076058

Ensembl Protein ID

OB06G18280.1

UniProt Accession

J3MCT4; J3MCT4_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB06G18280	OB06G18280.1	OB06G18280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-17	63.5	5	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk....tcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ef+CpIs+elM dPv++p+G t++r ++e ++a g +    +  ++ +   +  l+Pn  l+r i+++c++ 
   Q: 5    TPPEFVCPISGELMGDPVIVPTGETFERGCVEACIALGFTpaalSACMDLAASPPPVLIPNANLKRAISSYCDRA 79
           69**************************************998877778888889999**************987 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAGATPPEFV CPISGELMGD PVIVPTGETF ERGCVEACIA LGFTPAALSA CMDLAASPPP 60
VLIPNANLKR AISSYCDRAG LPHPFAVAPE EARSIVRRLM AAQEPAPATR VDGGRFESSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGGAG CCACCCCGCC GGAGTTCGTG TGCCCCATCT CCGGCGAGCT GATGGGCGAC 60
CCGGTGATCG TCCCCACCGG CGAGACCTTC GAGCGCGGCT GCGTCGAGGC GTGCATAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014649	Brachypodium distachyon	43.32	2.00e-30	126.00
IUUC-Hvu-047842	Hordeum vulgare	46.48	7.00e-11	61.20
IUUC-Lpe-051436	Leersia perrieri	73.98	2.00e-83	301.00
IUUC-Oba-075145	Oryza barthii	83.42	4.00e-78	283.00
IUUC-Ogl-077351	Oryza glaberrima	85.04	6.00e-94	337.00
IUUC-Ogu-077999	Oryza glumaepatula	85.04	7.00e-94	336.00
IUUC-Oin-079760	Oryza indica	85.47	7.00e-95	340.00
IUUC-Olo-080822	Oryza longistaminata	68.46	4.00e-40	155.00
IUUC-Ome-081595	Oryza meridionalis	81.59	3.00e-92	331.00
IUUC-Oni-082363	Oryza nivara	85.90	2.00e-95	342.00
IUUC-Opu-083809	Oryza punctata	83.97	4.00e-99	353.00
IUUC-Oru-084445	Oryza rufipogon	84.30	7.00e-87	314.00
IUUC-Osa-085631	Oryza sativa	85.47	7.00e-95	340.00
IUUC-Sbi-113814	Sorghum bicolor	42.74	2.00e-18	86.30
IUUC-Tae-124240	Triticum aestivum	41.94	2.00e-34	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence