iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080562

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMDW01057609.1_FG001	AMDW01057609.1_FGT001	AMDW01057609.1_FGP001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-08	33.1	137	177

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle++  +++ ++l+C+H fh+ C++ w        +++ CP+C
   Q: 137  CPICLEEYdyENPKMTLQCNHNFHLCCIYEW------MERSQACPVC 177
           ******885566566799*************......9999****** PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

GSIARPRADT RVAPDQGRIS LTAPTQHDSM DTFRCPPRPL PWDDPRFSHH TEHHPLVGGH 60
DKASATFHKS GSLGESKNAD SISNSKAVKD DGPSTAVKDD GSSTAVKDDG SSVKHHSDGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTCCATTG CTCGTCCAAG AGCGGACACA CGAGTTGCGC CTGATCAAGG AAGAATTAGT 60
CTCACTGCTC CAACACAGCA TGATTCGATG GATACTTTCC GATGCCCGCC AAGGCCCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000086	Aegilops tauschii	56.99	2.00e-54	204.00
IUUC-Afl-008724	Aspergillus flavus	48.78	3.00e-08	52.40
IUUC-Bdi-014179	Brachypodium distachyon	60.32	3.00e-60	223.00
IUUC-Cme-027114	Cyanidioschyzon merolae	53.12	5.00e-17	81.30
IUUC-Lpe-050780	Leersia perrieri	68.25	3.00e-70	256.00
IUUC-Oba-075260	Oryza barthii	98.40	6.00e-108	382.00
IUUC-Obr-076469	Oryza brachyantha	67.91	2.00e-68	250.00
IUUC-Ogu-078482	Oryza glumaepatula	97.79	2.00e-103	367.00
IUUC-Oin-079123	Oryza indica	94.12	2.00e-101	360.00
IUUC-Ome-081597	Oryza meridionalis	96.79	5.00e-106	375.00
IUUC-Oni-082856	Oryza nivara	98.93	1.00e-108	384.00
IUUC-Oru-084271	Oryza rufipogon	93.58	5.00e-101	358.00
IUUC-Osa-085761	Oryza sativa	93.58	4.00e-101	359.00
IUUC-Sit-109860	Setaria italica	61.90	2.00e-58	217.00
IUUC-Sbi-114306	Sorghum bicolor	56.84	2.00e-42	164.00
IUUC-Tae-123090	Triticum aestivum	58.60	8.00e-57	212.00
IUUC-Tur-125991	Triticum urartu	56.91	3.00e-53	200.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence