iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112708

Ensembl Protein ID

PGSC0003DMT400036938

UniProt Accession

M1B4J0; M1B4J0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400014242	PGSC0003DMT400036938	PGSC0003DMT400036938

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-09	36.7	248	279

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           Ht + + + +   +d l++s++ Dg++ +W +
   Q: 248  HTRKLRNIVLcptNDQLFASSALDGVVNLWQV 279
           55555555556656699*************97 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MWEEEAKGIR RDEEEALLDL IEQRTKNVEK IGRAIAYYTC ELEQKEKNLE EAQQQLARLR 60
AQAIVATSTS YHGNDLNLVK VERRSMSPIQ ISDDSSESLS ECEPQPDKDN TVPLQKSSTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGGAAG AAGAAGCAAA GGGTATAAGA AGGGACGAAG AAGAAGCGCT GTTGGATCTG 60
ATTGAGCAAC GTACTAAGAA TGTTGAAAAA ATTGGAAGAG CAATCGCTTA TTATACTTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sot:102579586

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	51.95	8.00e-118	416.00
IUUC-Atr-002878	Amborella trichopoda	47.52	6.00e-127	446.00
IUUC-Aly-006473	Arabidopsis lyrata	64.19	9.00e-144	502.00
IUUC-Ath-006806	Arabidopsis thaliana	65.01	1.00e-145	508.00
IUUC-Bdi-014216	Brachypodium distachyon	59.54	3.00e-124	437.00
IUUC-Bol-015463	Brassica oleracea	48.39	7.00e-145	506.00
IUUC-Bra-017074	Brassica rapa	62.93	2.00e-145	508.00
IUUC-Gma-042665	Glycine max	53.77	6.00e-170	589.00
IUUC-Hvu-047292	Hordeum vulgare	59.07	2.00e-103	367.00
IUUC-Lpe-051627	Leersia perrieri	61.62	1.00e-127	448.00
IUUC-Mtr-058789	Medicago truncatula	51.89	1.00e-148	518.00
IUUC-Mac-065472	Musa acuminata	49.73	1.00e-147	514.00
IUUC-Oba-074995	Oryza barthii	58.09	1.00e-123	435.00
IUUC-Obr-076006	Oryza brachyantha	46.56	4.00e-127	447.00
IUUC-Ogl-077176	Oryza glaberrima	61.06	1.00e-126	445.00
IUUC-Ogu-078267	Oryza glumaepatula	61.06	1.00e-126	445.00
IUUC-Oin-079742	Oryza indica	61.06	4.00e-126	443.00
IUUC-Olo-080890	Oryza longistaminata	58.79	2.00e-114	404.00
IUUC-Ome-081454	Oryza meridionalis	60.78	1.00e-126	445.00
IUUC-Oni-083009	Oryza nivara	58.09	1.00e-123	435.00
IUUC-Opu-083781	Oryza punctata	60.81	3.00e-124	437.00
IUUC-Oru-084517	Oryza rufipogon	58.09	1.00e-123	435.00
IUUC-Osa-085484	Oryza sativa	61.06	8.00e-126	442.00
IUUC-Ppa-095859	Physcomitrella patens	53.82	5.00e-105	373.00
IUUC-Pop-099647	Populus trichocarpa	51.19	4.00e-155	540.00
IUUC-Ppe-101833	Prunus persica	54.14	2.00e-167	581.00
IUUC-Smo-109600	Selaginella moellendorffii	35.13	8.00e-45	172.00
IUUC-Sit-109887	Setaria italica	61.14	3.00e-127	447.00
IUUC-Sly-111601	Solanum lycopersicum	66.37	0.00e+00	738.00
IUUC-Sbi-114727	Sorghum bicolor	61.14	7.00e-128	449.00
IUUC-Tca-121644	Theobroma cacao	53.06	2.00e-160	557.00
IUUC-Tae-125240	Triticum aestivum	57.42	2.00e-125	441.00
IUUC-Vvi-131460	Vitis vinifera	52.81	7.00e-163	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence