iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131460

Ensembl Protein ID

VIT_17s0000g00230.t01

UniProt Accession

D7SH77; D7SH77_VITVI

Genbank Protein ID

CBI15757.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594950

Gene Name

VIT_17s0000g00230

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_17s0000g00230	VIT_17s0000g00230.t01	VIT_17s0000g00230.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-11	44.7	313	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf....sdtllvsGsdDgtikvWD 29
            +++++f    + + +v+G+ D+ + +W+
   Q: 313  IINSISFmpweN-PCFVTGGSDHAVVLWN 340
           599***997533.89*************9 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNARKPKVEV DDRITTEEDG EENSRDEQEE ALVALIEHRT KEVEHIRKRI TYYQSQLQEA 60
EKKLLDSQAQ LGRLRSKDNL VSSRSPLDNG TKKVKVERRS TSPLQLQSRP ELLIPAVNPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCCTCCTG TCGATTTCTT TCATTTGCCC TCAACAGCTC GACGGAGACG CAGAACGAAC 60
ACAAATACAC AAACGCACAG AGAGAAATGA ATGCGAGGAA GCCCAAGGTG GAGGTAGATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

vvi:100255948

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000679	Aegilops tauschii	56.99	2.00e-133	468.00
IUUC-Atr-002878	Amborella trichopoda	55.84	2.00e-151	528.00
IUUC-Aly-006473	Arabidopsis lyrata	62.45	4.00e-176	610.00
IUUC-Ath-006806	Arabidopsis thaliana	61.63	3.00e-173	600.00
IUUC-Bdi-014216	Brachypodium distachyon	51.63	2.00e-139	488.00
IUUC-Bol-015463	Brassica oleracea	62.50	0.00e+00	632.00
IUUC-Bra-017074	Brassica rapa	75.21	8.00e-170	589.00
IUUC-Gma-042665	Glycine max	67.65	0.00e+00	742.00
IUUC-Hvu-047292	Hordeum vulgare	66.31	7.00e-116	409.00
IUUC-Lpe-051627	Leersia perrieri	50.47	7.00e-145	506.00
IUUC-Mtr-058789	Medicago truncatula	66.53	0.00e+00	635.00
IUUC-Mac-065472	Musa acuminata	61.23	0.00e+00	629.00
IUUC-Oba-074995	Oryza barthii	62.11	8.00e-139	486.00
IUUC-Obr-076006	Oryza brachyantha	54.01	7.00e-151	526.00
IUUC-Ogl-077176	Oryza glaberrima	53.91	3.00e-146	511.00
IUUC-Ogu-078267	Oryza glumaepatula	53.71	5.00e-146	510.00
IUUC-Oin-079742	Oryza indica	65.56	1.00e-141	495.00
IUUC-Olo-080890	Oryza longistaminata	59.16	8.00e-129	452.00
IUUC-Ome-081454	Oryza meridionalis	53.71	4.00e-146	510.00
IUUC-Oni-083009	Oryza nivara	51.83	2.00e-142	498.00
IUUC-Opu-083781	Oryza punctata	66.29	3.00e-140	490.00
IUUC-Oru-084517	Oryza rufipogon	51.83	2.00e-142	498.00
IUUC-Osa-085484	Oryza sativa	65.56	1.00e-141	494.00
IUUC-Ppa-095859	Physcomitrella patens	44.75	8.00e-112	396.00
IUUC-Pop-099647	Populus trichocarpa	67.42	0.00e+00	692.00
IUUC-Ppe-101833	Prunus persica	71.32	0.00e+00	761.00
IUUC-Smo-109600	Selaginella moellendorffii	37.60	2.00e-45	174.00
IUUC-Sit-109887	Setaria italica	66.29	3.00e-142	498.00
IUUC-Sly-111601	Solanum lycopersicum	59.44	0.00e+00	692.00
IUUC-Stu-112708	Solanum tuberosum	53.68	2.00e-166	578.00
IUUC-Sbi-114727	Sorghum bicolor	52.61	6.00e-152	529.00
IUUC-Tca-121644	Theobroma cacao	70.97	0.00e+00	716.00
IUUC-Tae-123256	Triticum aestivum	62.29	2.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence