iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076065

Ensembl Protein ID

OB03G48890.1

UniProt Accession

J3LV13; J3LV13_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G48890	OB03G48890.1	OB03G48890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-25	86.5	622	658
UBD/Beta-Prp	9.20e-51	173.4	492	732

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           Ht++v+c+++  s+ ll+s s D t+kvW++ +g++++
   Q: 622  HTNEVNCICWdeSGELLASVSQD-TVKVWSVASGTCIH 658
           9*********9777*********.***********987 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvtt.gkllrslsgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvhtlkghedsvlsls 101
           +h+++it++ f p+++++at+s dg++++w++ +   +++++ gh++ vt+v+f+p++ + v +s D  + i  w + +++  h+ + ++     ++
   Q: 492  EHSNFITDIRFRPNSNQVATSSSDGSVRLWNAIErTGAVQTFLGHSSHVTSVDFHPKS-MEVLCSCDdnGEIFFWKIGQSSFSHITRMKQGGTGRVR 587
           6999***************************86614569******************8.77777777235555669999999999999999999999 PP
   S: 102  fsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs 197
           f+p  g++l++++  +++++ d+e+++ l+++ ++h+  vnc++++++g ll+s s D tv++W++++g+++++l++ h ++ +s +f++  + ++ 
   Q: 588  FQPlIGQHLAVAT-GSIVNIIDVEKDTSLHSLPKVHTNEVNCICWDESGELLASVSQD-TVKVWSVASGTCIHELRS-HGNQYQSCIFHPRYPNVLI 681
           ***8778888888.579****************************************9.79***************9.******************* PP
   S: 198  gsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           ++  +t +lw+l+ ++  +t+++h+  +  ++ s+ +  ++s+s+D+s+++W
   Q: 682  VGGYQTMELWSLSDNH-RNTVQAHEGLIAALAHSQFTGMIASASHDRSVKLW 732
           ************8776.9********************************** PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MARSNWEADK MLDVYIYDYL VKRNLHNTAK AFMSEGKVAT DPVAIDAPGG FLFEWWSIFW 60
DIFDARTRDN KLLSPAPPPP HPPPPPMDIK SREQQMRLQL LQQRAGAMDA DVSAVLASKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGATGGCGC GGAGCAACTG GGAGGCAGAC AAGATGTAAT TTGGTTTGTC GAACCCCTTC 60
TCCAGCTAGG CGAGGAAGGA TGAACATGAA CTAACAGCGT CTGATCCAGG CTGGACGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000895	Aegilops tauschii	72.67	0.00e+00	1000.00
IUUC-Bdi-014357	Brachypodium distachyon	77.51	0.00e+00	1074.00
IUUC-Oba-075852	Oryza barthii	81.23	0.00e+00	1070.00
IUUC-Ogl-077588	Oryza glaberrima	89.20	0.00e+00	1194.00
IUUC-Ogu-078076	Oryza glumaepatula	82.52	0.00e+00	1103.00
IUUC-Oin-079375	Oryza indica	84.63	0.00e+00	1168.00
IUUC-Ome-081919	Oryza meridionalis	82.03	0.00e+00	1093.00
IUUC-Oni-082308	Oryza nivara	82.13	0.00e+00	1102.00
IUUC-Opu-083437	Oryza punctata	84.27	0.00e+00	1165.00
IUUC-Oru-085080	Oryza rufipogon	82.39	0.00e+00	1101.00
IUUC-Osa-085544	Oryza sativa	89.20	0.00e+00	1194.00
IUUC-Sit-110244	Setaria italica	75.20	0.00e+00	1009.00
IUUC-Sbi-114483	Sorghum bicolor	72.90	0.00e+00	791.00
IUUC-Tae-125279	Triticum aestivum	75.97	0.00e+00	1033.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence