iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017684

Ensembl Protein ID

Bra002350.1-P

UniProt Accession

M4CDR9; M4CDR9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra002350	Bra002350.1	Bra002350.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-31	105.6	69	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrtgvllks 38
           H++++t+la+ d t + sGs+D ++++WD ++++++k+
   Q: 69   HEGPITSLAL-DmTSIFSGSWDMSVRIWDRSSFKCIKT 105
           9*********.779***************999999875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MWGMEEGLSI AASKPLGCTI RAVAADTKLL VAGGTDGFIH CWKAVDGLRD LFDLTGFQKE 60
KTEFRLWEHE GPITSLALDM TSIFSGSWDM SVRIWDRSSF KCIKTLRHSD WVWGLAPHET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGGGAA TGGAAGAAGG CTTGTCTATT GCAGCGTCTA AACCGCTTGG TTGTACTATT 60
AGAGCAGTTG CGGCTGATAC GAAGCTCTTG GTAGCTGGCG GTACTGATGG TTTTATACAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	54.34	1.00e-110	394.00
IUUC-Atr-002870	Amborella trichopoda	50.56	1.00e-90	327.00
IUUC-Aly-005424	Arabidopsis lyrata	90.06	0.00e+00	628.00
IUUC-Ath-007005	Arabidopsis thaliana	89.20	6.00e-179	620.00
IUUC-Bdi-014622	Brachypodium distachyon	56.16	1.00e-112	399.00
IUUC-Bol-016449	Brassica oleracea	97.73	0.00e+00	671.00
IUUC-Gma-043866	Glycine max	67.90	2.00e-124	439.00
IUUC-Hvu-047789	Hordeum vulgare	54.62	1.00e-111	396.00
IUUC-Lpe-051245	Leersia perrieri	52.66	3.00e-103	368.00
IUUC-Mtr-058000	Medicago truncatula	64.80	1.00e-126	446.00
IUUC-Mac-065354	Musa acuminata	58.77	1.00e-110	393.00
IUUC-Oba-074979	Oryza barthii	56.15	2.00e-111	396.00
IUUC-Obr-076615	Oryza brachyantha	55.43	9.00e-111	393.00
IUUC-Ogl-077075	Oryza glaberrima	56.15	8.00e-112	397.00
IUUC-Ogu-078476	Oryza glumaepatula	55.87	4.00e-111	395.00
IUUC-Oin-079267	Oryza indica	56.15	2.00e-111	396.00
IUUC-Olo-080272	Oryza longistaminata	56.15	2.00e-111	395.00
IUUC-Ome-081994	Oryza meridionalis	55.59	2.00e-111	395.00
IUUC-Oni-082607	Oryza nivara	56.15	2.00e-111	396.00
IUUC-Opu-083533	Oryza punctata	56.30	7.00e-113	400.00
IUUC-Oru-084485	Oryza rufipogon	56.15	3.00e-111	395.00
IUUC-Osa-085675	Oryza sativa	56.15	2.00e-111	395.00
IUUC-Ppa-095179	Physcomitrella patens	44.62	7.00e-69	254.00
IUUC-Pop-099631	Populus trichocarpa	68.99	2.00e-137	481.00
IUUC-Ppe-102090	Prunus persica	67.88	4.00e-136	478.00
IUUC-Smo-109251	Selaginella moellendorffii	39.94	7.00e-58	217.00
IUUC-Sit-110702	Setaria italica	58.02	1.00e-108	386.00
IUUC-Sly-110878	Solanum lycopersicum	65.63	3.00e-131	461.00
IUUC-Stu-112399	Solanum tuberosum	64.71	2.00e-128	452.00
IUUC-Sbi-114384	Sorghum bicolor	54.90	4.00e-108	385.00
IUUC-Tca-121388	Theobroma cacao	70.67	7.00e-140	490.00
IUUC-Tae-125186	Triticum aestivum	54.34	9.00e-111	393.00
IUUC-Tur-126520	Triticum urartu	54.37	4.00e-110	392.00
IUUC-Vvi-131268	Vitis vinifera	68.72	4.00e-132	464.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence