iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078104

Ensembl Protein ID

OGLUM04G21850.1

UniProt Accession

A0A0D9ZPB5; A0A0D9ZPB5_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G21850	OGLUM04G21850.1	OGLUM04G21850.1
OGLUM04G21850	OGLUM04G21850.2	OGLUM04G21850.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-08	35.0	273	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 17   vsGsdDgtikvWDlrt 32
           v+G  Dgti+ WD ++
   Q: 273  VTGHLDGTIRFWDASC 288
           99***********655 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MPYWIPFSES YGSGANVGNE VEVAFVSPQP LAENNRVLII FRDGIMSLWD IKTSKVVSLS 60
GKSMQQQSHQ EAKAVTSACW ACAKGSKIAI GFDSGDIYLW SIPDILNAQN LSSMGNQNLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCATTTTC TCTGCAGGAA TGGGCAGATC AAGCTGTTCG GCCGCGACAA CACGCAGGCG 60
CTGCTCCAAT CCCCGTCCCC CGTCCCCTCC AAGTTCCTGC GGGTATCGTC GCTGATTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013905--Lgl_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF08596--Lgl_C

SMART

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005994	Arabidopsis lyrata	36.56	5.00e-147	514.00
IUUC-Ath-007593	Arabidopsis thaliana	35.82	3.00e-136	478.00
IUUC-Bol-015893	Brassica oleracea	36.78	1.00e-138	487.00
IUUC-Bra-018080	Brassica rapa	36.06	1.00e-134	473.00
IUUC-Dor-030976	Dipodomys ordii	55.26	5.00e-04	40.00
IUUC-Lpe-051019	Leersia perrieri	84.44	0.00e+00	1407.00
IUUC-Mtr-057936	Medicago truncatula	39.56	5.00e-162	564.00
IUUC-Oba-075817	Oryza barthii	99.76	0.00e+00	1642.00
IUUC-Obr-076813	Oryza brachyantha	87.77	0.00e+00	1430.00
IUUC-Ogl-077896	Oryza glaberrima	95.73	0.00e+00	1623.00
IUUC-Oin-079712	Oryza indica	95.85	0.00e+00	1630.00
IUUC-Olo-081006	Oryza longistaminata	82.09	0.00e+00	1265.00
IUUC-Ome-081753	Oryza meridionalis	98.32	0.00e+00	1611.00
IUUC-Oni-082419	Oryza nivara	99.88	0.00e+00	1647.00
IUUC-Opu-083377	Oryza punctata	93.38	0.00e+00	1576.00
IUUC-Oru-085098	Oryza rufipogon	99.76	0.00e+00	1646.00
IUUC-Osa-085420	Oryza sativa	95.62	0.00e+00	1627.00
IUUC-Pop-099380	Populus trichocarpa	39.62	1.00e-160	560.00
IUUC-Ppe-101373	Prunus persica	41.44	7.00e-173	600.00
IUUC-Sly-111741	Solanum lycopersicum	40.89	3.00e-165	575.00
IUUC-Sar-113145	Sorex araneus	73.68	3.00e-03	37.40
IUUC-Tsy-119013	Tarsius syrichta	73.68	3.00e-03	37.40

Created Date

25-Jun-2017