iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078548

Ensembl Protein ID

OGLUM04G16930.1

UniProt Accession

A0A0D9ZMG6; A0A0D9ZMG6_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM04G16930	OGLUM04G16930.1	OGLUM04G16930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.90e-31	107.2	279	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pee++CpIsl+lM+dPv+++sG+ty+r++Iekw++sg++tcP+tr +l++ +++Pn+ ++ li +wce+n++
   Q: 279  PPEELRCPISLQLMHDPVIIASGQTYERACIEKWFSSGNTTCPKTRNELSQLSMTPNYCIKGLIASWCEQNGV 351
           59********************************************************************985 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MEKVEVDGNF IGTGNWKLHG ALCKQLHKVV LEVLDVIPVL EATRPGNSSG LLALSSLRIA 60
VEKAKNLLQY CSECSKLYLA FTAENVLAKF EKARYALLES LHQLEETLPE AASSQILDIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCCCAAAA CAAATCAATT TCCTTCCTCC CGACCGAGCA AGGGGGCGAA AGGACGAGCT 60
ACGGACCGAG CCATGGAGGA ATTCAAGGCT CGCTCCTTCG TCGCCTTGTC TCCCTCGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000137	Aegilops tauschii	69.96	0.00e+00	897.00
IUUC-Bdi-014255	Brachypodium distachyon	73.02	0.00e+00	922.00
IUUC-Hvu-047784	Hordeum vulgare	71.02	0.00e+00	890.00
IUUC-Lpe-051367	Leersia perrieri	84.03	0.00e+00	1253.00
IUUC-Oba-075113	Oryza barthii	99.75	0.00e+00	1445.00
IUUC-Obr-076015	Oryza brachyantha	80.96	0.00e+00	1223.00
IUUC-Ogl-077487	Oryza glaberrima	99.88	0.00e+00	1448.00
IUUC-Oin-079540	Oryza indica	99.88	0.00e+00	1450.00
IUUC-Olo-080654	Oryza longistaminata	98.40	0.00e+00	1402.00
IUUC-Ome-081838	Oryza meridionalis	97.76	0.00e+00	1462.00
IUUC-Oni-082806	Oryza nivara	99.88	0.00e+00	1449.00
IUUC-Opu-083802	Oryza punctata	91.10	0.00e+00	1337.00
IUUC-Oru-084879	Oryza rufipogon	100.00	0.00e+00	1450.00
IUUC-Osa-085564	Oryza sativa	99.88	0.00e+00	1450.00
IUUC-Sit-110478	Setaria italica	65.91	0.00e+00	943.00
IUUC-Sbi-114006	Sorghum bicolor	64.75	0.00e+00	860.00
IUUC-Tae-123859	Triticum aestivum	70.56	0.00e+00	896.00
IUUC-Tur-126528	Triticum urartu	69.32	0.00e+00	860.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence