iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051020

Ensembl Protein ID

LPERR04G19140.1

UniProt Accession

A0A0D9W8S4; A0A0D9W8S4_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR04G19140	LPERR04G19140.1	LPERR04G19140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.20e-32	110.9	4	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ flCpIs+elM+dPv++++G+tydr+sIe+w+ ++gk tcP t+q+l++ dl+Pn+tl+r+i++w ++ ss
   Q: 4    PPPLFLCPISMELMEDPVTVATGVTYDRRSIERWFFKYGKtTCPATMQRLASFDLTPNHTLKRVIESWFDRASS 77
           799********************************998888***************************999876 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MEEPPPLFLC PISMELMEDP VTVATGVTYD RRSIERWFFK YGKTTCPATM QRLASFDLTP 60
NHTLKRVIES WFDRASSSSS PSPSAPAPAT RVLARERMPS VLAGIEETPF KVTALRNIRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGAGC CTCCTCCTCT ATTCCTGTGC CCAATCTCCA TGGAGCTAAT GGAGGACCCC 60
GTCACGGTGG CCACCGGCGT TACCTACGAC CGCCGCAGCA TCGAGCGGTG GTTCTTCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002928	Amborella trichopoda	40.93	9.00e-86	310.00
IUUC-Bdi-014881	Brachypodium distachyon	67.26	3.00e-127	447.00
IUUC-Hvu-047092	Hordeum vulgare	69.68	5.00e-137	479.00
IUUC-Mac-064665	Musa acuminata	44.86	9.00e-96	342.00
IUUC-Oba-074977	Oryza barthii	79.04	2.00e-124	437.00
IUUC-Obr-076700	Oryza brachyantha	78.37	8.00e-160	555.00
IUUC-Ogl-077950	Oryza glaberrima	81.19	1.00e-169	588.00
IUUC-Ogu-078575	Oryza glumaepatula	81.19	1.00e-169	588.00
IUUC-Oin-079500	Oryza indica	81.19	2.00e-169	588.00
IUUC-Oni-082805	Oryza nivara	81.19	2.00e-169	588.00
IUUC-Opu-083721	Oryza punctata	82.30	2.00e-170	590.00
IUUC-Oru-084349	Oryza rufipogon	80.96	3.00e-169	587.00
IUUC-Osa-086088	Oryza sativa	80.73	7.00e-169	585.00
IUUC-Ppe-101339	Prunus persica	40.82	1.00e-74	272.00
IUUC-Sit-110629	Setaria italica	70.67	1.00e-142	499.00
IUUC-Sly-111695	Solanum lycopersicum	39.81	2.00e-81	295.00
IUUC-Stu-112376	Solanum tuberosum	40.28	3.00e-82	298.00
IUUC-Sbi-114088	Sorghum bicolor	74.60	9.00e-142	495.00
IUUC-Tae-124754	Triticum aestivum	69.84	1.00e-135	475.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence