iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__2847__AT2G46340.1	fgenesh2_kg.4__2847__AT2G46340.1	fgenesh2_kg.4__2847__AT2G46340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-28	97.6	806	837

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           H+ + ++++f  sd t +vsGsdD+++k+W++
   Q: 806  HQKRAWSVDFspSDpTKFVSGSDDCSVKLWSI 837
           888899*****9889***************96 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MPVMERVAEE TVASNNNIQL KGRVDDVPCK LDALHSNMVI QSETRNSDCP GSSAHRTLEM 60
TKPPPPEDSA GAKLSVEELT LGNYRIVQGT NNTNMDSSRA GKFEHLYRLA RGSSLRPGDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAGAGAAAGA GAGATTCATA TTTGTGTGAC TAGAGAGAGA GAGAGATTCA TTATGTTTTT 60
CGTAATTATT ATCATCAATA TATGACAAAT TTATAGCCTC ACCTTTCTTC TTCTTCTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00069--Pkinase
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016604--C:nuclear body
GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0009658--P:chloroplast organization
GO:0010100--P:negative regulation of photomorphogenesis
GO:0009640--P:photomorphogenesis
GO:0010017--P:red or far-red light signaling pathway
GO:2000028--P:regulation of photoperiodism, flowering
GO:0009637--P:response to blue light
GO:0010218--P:response to far red light
GO:0010114--P:response to red light
GO:0048575--P:short-day photoperiodism, flowering

KEGG

aly:ARALYDRAFT_483787

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000403	Aegilops tauschii	46.86	0.00e+00	762.00
IUUC-Atr-002506	Amborella trichopoda	44.87	0.00e+00	709.00
IUUC-Ath-007297	Arabidopsis thaliana	93.51	0.00e+00	1893.00
IUUC-Bdi-014698	Brachypodium distachyon	48.00	0.00e+00	758.00
IUUC-Bol-015589	Brassica oleracea	75.27	0.00e+00	1426.00
IUUC-Bra-016642	Brassica rapa	81.00	0.00e+00	1559.00
IUUC-Gma-043294	Glycine max	48.91	0.00e+00	785.00
IUUC-Hvu-047750	Hordeum vulgare	50.31	0.00e+00	767.00
IUUC-Lpe-051349	Leersia perrieri	46.79	0.00e+00	778.00
IUUC-Mac-064712	Musa acuminata	46.53	0.00e+00	786.00
IUUC-Obr-076441	Oryza brachyantha	51.12	0.00e+00	769.00
IUUC-Ogl-077669	Oryza glaberrima	45.89	0.00e+00	778.00
IUUC-Ogu-078009	Oryza glumaepatula	40.49	7.00e-176	610.00
IUUC-Oin-079775	Oryza indica	45.89	0.00e+00	778.00
IUUC-Olo-080230	Oryza longistaminata	39.89	1.00e-173	603.00
IUUC-Opu-083153	Oryza punctata	40.66	8.00e-177	613.00
IUUC-Osa-085875	Oryza sativa	45.89	0.00e+00	777.00
IUUC-Pop-099610	Populus trichocarpa	48.85	0.00e+00	844.00
IUUC-Ppe-101782	Prunus persica	50.15	0.00e+00	868.00
IUUC-Sly-111623	Solanum lycopersicum	46.95	0.00e+00	790.00
IUUC-Stu-112382	Solanum tuberosum	45.45	0.00e+00	810.00
IUUC-Sbi-114133	Sorghum bicolor	48.89	0.00e+00	740.00
IUUC-Tca-121762	Theobroma cacao	51.73	0.00e+00	900.00
IUUC-Tae-123049	Triticum aestivum	50.06	0.00e+00	778.00
IUUC-Tur-126357	Triticum urartu	48.24	0.00e+00	725.00
IUUC-Vvi-131450	Vitis vinifera	49.65	0.00e+00	885.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence