iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049460

Ensembl Protein ID

ENSLACP00000006855.1

UniProt Accession

H3AB34; H3AB34_LATCH

Genbank Protein ID

ENSLACP00000006855

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01042798

Gene Name

pwp2h; LOC102361154

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000006084.1	ENSLACT00000006913.1	ENSLACP00000006855.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-24	85.3	327	361
UBD/Beta-Prp	5.60e-62	209.8	245	527

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH +s+ +la+ +d  ++v+G+dDg++kvW++ +g
   Q: 327  GHFNSMVSLAYsPDgQYVVTGGDDGKVKVWNTNSG 361
           7889999*****999****************8776 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD.rtikvwdlstgkcvhtlkghedsvl 98
            +t+ ++++++ ll+tg+++g   ++++ + +l++sl s   +   +  f + g+++v +    + + vw+ ++ +++ + +gh +s +
   Q: 245  NLTSAAYHKKTHLLVTGFASGIFHLHELPEFNLIHSLrSVGFPCKVSQGFASFGDTFVVVVPGlGQLLVWEWQSESYILKQQGHFNSMV 333
           5788999******************************76666666667799999999999999999*********************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           sl++sp+g+++v+G++d  ++vw++++g c+  t+++h++ v++v++ ++g+++ s+slD+tvr +d  + +  rt+t+    +  +++
   Q: 334  SLAYSPDGQYVVTGGDDGKVKVWNTNSGFCFV-TFTEHTSNVTGVTFTSTGCVVLSSSLDGTVRAFDFHRYRNFRTFTSPRPTQFSCVE 421
           ********************************.******************************************************** PP
   S: 188  fdsngkelvsgsldg.tvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl.rsgdllktlqlhnssvisvavls 274
            ds+g+ + +gs+d+ +v +w++qtg+ ++ l gh+ +++s+ f p + +l+++s D+++r+Wd+ +s  +  tl+l+++  i+v++ +
   Q: 422  TDSSGEIVCAGSQDSfDVFVWSMQTGRLLDVLAGHEGPISSLSFNPVQAILATASWDKTVRLWDMfDSWRIKETLTLTAD-AIAVTY-R 508
           **************967**********************************************86367788888888774.455555.8 PP
   S: 275  fgdnvlvlgsedskvniwk 293
           +++++l+ +s+d+++ +w+
   Q: 509  PDGKELAVASQDGQITFWD 527
           ******************7 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

SNKSETLPVT TTHNITCVGL SPDGNLAILV DEEGAAVLVS LISKSVLHHF HFHKPVHCIC 60
FSPDGKKFVV TKDNVALLYH APGKTREFNA FVLDKSYFGP YDETTFIDWT DDSKCFAVGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTAACAAAT CCGAGACTTT GCCTGTGACT ACAACCCACA ACATAACTTG TGTGGGGCTC 60
TCTCCGGATG GAAACTTGGC CATACTGGTT GATGAAGGTA ATTTTTGTAT CTACAGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR027145--PWP2
IPR011044--Quino_amine_DH_bsu
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0055123--P:digestive system development
GO:0000028--P:ribosomal small subunit assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	71.71	0.00e+00	1288.00
IUUC-Atr-003033	Amborella trichopoda	39.35	5.00e-175	608.00
IUUC-Apl-003219	Anas platyrhynchos	77.56	0.00e+00	1372.00
IUUC-Aca-004950	Anolis carolinensis	76.22	0.00e+00	1340.00
IUUC-Aly-006213	Arabidopsis lyrata	38.13	5.00e-167	581.00
IUUC-Ath-006593	Arabidopsis thaliana	37.82	1.00e-164	573.00
IUUC-Ago-007916	Ashbya gossypii	40.43	4.00e-180	625.00
IUUC-Acl-008225	Aspergillus clavatus	44.05	0.00e+00	668.00
IUUC-Afl-008390	Aspergillus flavus	42.63	0.00e+00	667.00
IUUC-Afu-009039	Aspergillus fumigatus	43.38	0.00e+00	668.00
IUUC-Ani-009228	Aspergillus nidulans	39.75	3.00e-164	572.00
IUUC-Ang-009663	Aspergillus niger	41.95	0.00e+00	652.00
IUUC-Aor-009923	Aspergillus oryzae	42.63	0.00e+00	667.00
IUUC-Ate-010264	Aspergillus terreus	42.86	0.00e+00	669.00
IUUC-Ame-010790	Astyanax mexicanus	63.83	3.00e-135	474.00
IUUC-Bgr-012066	Blumeria graminis	43.05	0.00e+00	671.00
IUUC-Bta-012399	Bos taurus	72.22	0.00e+00	1244.00
IUUC-Bci-013757	Botrytis cinerea	42.93	0.00e+00	632.00
IUUC-Bdi-015028	Brachypodium distachyon	40.36	2.00e-176	612.00
IUUC-Bol-016521	Brassica oleracea	39.43	3.00e-170	592.00
IUUC-Bra-017096	Brassica rapa	39.67	9.00e-172	597.00
IUUC-Cel-018690	Caenorhabditis elegans	36.67	2.00e-159	556.00
IUUC-Cja-019229	Callithrix jacchus	72.59	0.00e+00	1265.00
IUUC-Cfa-020504	Canis familiaris	71.66	0.00e+00	1286.00
IUUC-Cpo-021574	Cavia porcellus	72.12	0.00e+00	1284.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	44.99	3.00e-143	502.00
IUUC-Csa-023436	Chlorocebus sabaeus	72.30	0.00e+00	1256.00
IUUC-Cin-025397	Ciona intestinalis	58.46	0.00e+00	820.00
IUUC-Csv-026194	Ciona savignyi	42.94	0.00e+00	650.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	42.24	0.00e+00	634.00
IUUC-Cne-027031	Cryptococcus neoformans	41.69	0.00e+00	700.00
IUUC-Cme-027276	Cyanidioschyzon merolae	30.32	1.00e-94	341.00
IUUC-Dre-027514	Danio rerio	65.57	0.00e+00	1184.00
IUUC-Dno-029191	Dasypus novemcinctus	71.96	0.00e+00	1169.00
IUUC-Dor-030149	Dipodomys ordii	71.18	0.00e+00	1262.00
IUUC-Dse-031260	Dothistroma septosporum	49.12	1.00e-156	546.00
IUUC-Dme-032043	Drosophila melanogaster	44.56	0.00e+00	752.00
IUUC-Ete-033102	Echinops telfairi	74.23	0.00e+00	881.00
IUUC-Eca-033223	Equus caballus	72.45	0.00e+00	1290.00
IUUC-Fca-035795	Felis catus	67.25	0.00e+00	1157.00
IUUC-Fal-036830	Ficedula albicollis	75.29	0.00e+00	1308.00
IUUC-Fox-037835	Fusarium oxysporum	41.11	0.00e+00	639.00
IUUC-Fso-038324	Fusarium solani	41.52	0.00e+00	632.00
IUUC-Gmo-039355	Gadus morhua	70.00	0.00e+00	1231.00
IUUC-Ggr-039840	Gaeumannomyces graminis	42.51	2.00e-176	612.00
IUUC-Gga-040907	Gallus gallus	78.96	0.00e+00	901.00
IUUC-Gac-042624	Gasterosteus aculeatus	68.79	0.00e+00	1197.00
IUUC-Gma-043034	Glycine max	38.32	1.00e-176	613.00
IUUC-Hsa-046327	Homo sapiens	71.95	0.00e+00	1280.00
IUUC-Hvu-047416	Hordeum vulgare	39.65	2.00e-172	599.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	70.68	0.00e+00	1278.00
IUUC-Kpa-049150	Komagataella pastoris	42.68	0.00e+00	640.00
IUUC-Lpe-050840	Leersia perrieri	40.07	2.00e-174	606.00
IUUC-Loc-052733	Lepisosteus oculatus	73.22	0.00e+00	1296.00
IUUC-Lma-053277	Leptosphaeria maculans	41.51	0.00e+00	656.00
IUUC-Laf-054294	Loxodonta africana	73.11	0.00e+00	1227.00
IUUC-Mcc-054624	Macaca mulatta	72.29	0.00e+00	1280.00
IUUC-Meu-056665	Macropus eugenii	61.13	0.00e+00	797.00
IUUC-Mor-057288	Magnaporthe oryzae	41.33	2.00e-179	622.00
IUUC-Mpo-057594	Magnaporthe poae	42.82	1.00e-177	616.00
IUUC-Mtr-058700	Medicago truncatula	40.33	0.00e+00	649.00
IUUC-Mla-058846	Melampsora laricipopulina	41.38	0.00e+00	641.00
IUUC-Mga-059207	Meleagris gallopavo	66.28	0.00e+00	1134.00
IUUC-Mvi-060327	Microbotryum violaceum	43.91	0.00e+00	689.00
IUUC-Mmr-061264	Microcebus murinus	72.81	0.00e+00	1265.00
IUUC-Mdo-062327	Monodelphis domestica	74.48	0.00e+00	1309.00
IUUC-Mmu-063542	Mus musculus	72.30	0.00e+00	1258.00
IUUC-Mac-065142	Musa acuminata	40.41	5.00e-176	611.00
IUUC-Mpu-066098	Mustela putorius furo	72.06	0.00e+00	1159.00
IUUC-Mlu-067056	Myotis lucifugus	66.71	0.00e+00	1135.00
IUUC-Nfi-068323	Neosartorya fischeri	43.38	0.00e+00	667.00
IUUC-Ncr-068925	Neurospora crassa	40.18	0.00e+00	667.00
IUUC-Nle-068970	Nomascus leucogenys	71.95	0.00e+00	1277.00
IUUC-Opr-070966	Ochotona princeps	80.73	5.00e-159	554.00
IUUC-Ont-071252	Oreochromis niloticus	69.73	0.00e+00	1231.00
IUUC-Oan-072737	Ornithorhynchus anatinus	72.25	0.00e+00	1254.00
IUUC-Oba-075794	Oryza barthii	38.81	2.00e-168	585.00
IUUC-Obr-076617	Oryza brachyantha	40.10	8.00e-177	613.00
IUUC-Ogl-077022	Oryza glaberrima	40.21	8.00e-180	624.00
IUUC-Ogu-078757	Oryza glumaepatula	32.38	2.00e-113	403.00
IUUC-Oin-079813	Oryza indica	40.10	2.00e-177	615.00
IUUC-Olo-080265	Oryza longistaminata	39.98	4.00e-176	611.00
IUUC-Ome-081494	Oryza meridionalis	40.33	1.00e-178	619.00
IUUC-Oni-082639	Oryza nivara	31.90	2.00e-113	403.00
IUUC-Opu-084005	Oryza punctata	40.38	1.00e-178	619.00
IUUC-Oru-084883	Oryza rufipogon	31.79	2.00e-112	399.00
IUUC-Osa-086158	Oryza sativa	40.33	8.00e-179	620.00
IUUC-Ola-086822	Oryzias latipes	68.21	0.00e+00	1211.00
IUUC-Olu-087741	Ostreococcus lucimarinus	32.28	4.00e-20	90.10
IUUC-Oga-088887	Otolemur garnettii	73.44	0.00e+00	1246.00
IUUC-Oar-090110	Ovis aries	69.99	0.00e+00	1194.00
IUUC-Pan-092808	Papio anubis	72.41	0.00e+00	1285.00
IUUC-Psi-093954	Pelodiscus sinensis	77.74	0.00e+00	1398.00
IUUC-Pno-094922	Phaeosphaeria nodorum	41.59	0.00e+00	669.00
IUUC-Ppa-095678	Physcomitrella patens	40.78	3.00e-166	578.00
IUUC-Pfo-097175	Poecilia formosa	69.68	0.00e+00	1239.00
IUUC-Pab-098155	Pongo abelii	72.44	0.00e+00	1286.00
IUUC-Pop-099635	Populus trichocarpa	39.86	2.00e-180	626.00
IUUC-Pca-100947	Procavia capensis	68.79	0.00e+00	1196.00
IUUC-Ppe-101552	Prunus persica	39.88	0.00e+00	646.00
IUUC-Pva-102744	Pteropus vampyrus	66.90	0.00e+00	1152.00
IUUC-Pgr-103389	Puccinia graminis	41.89	0.00e+00	662.00
IUUC-Ptt-103953	Puccinia triticina	34.84	3.00e-145	508.00
IUUC-Pte-104079	Pyrenophora teres	42.21	0.00e+00	656.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	42.21	0.00e+00	654.00
IUUC-Rno-105502	Rattus norvegicus	71.66	0.00e+00	1285.00
IUUC-Sce-106390	Saccharomyces cerevisiae	42.80	0.00e+00	655.00
IUUC-Sha-107264	Sarcophilus harrisii	70.84	8.00e-171	592.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	43.61	0.00e+00	685.00
IUUC-Spo-108348	Schizosaccharomyces pombe	44.24	0.00e+00	671.00
IUUC-Smo-108982	Selaginella moellendorffii	42.96	0.00e+00	641.00
IUUC-Sit-110304	Setaria italica	40.38	0.00e+00	641.00
IUUC-Sly-111620	Solanum lycopersicum	48.28	2.00e-156	545.00
IUUC-Stu-112877	Solanum tuberosum	40.99	0.00e+00	658.00
IUUC-Sbi-114702	Sorghum bicolor	41.80	0.00e+00	638.00
IUUC-Sre-115129	Sporisorium reilianum	39.70	1.00e-180	627.00
IUUC-Ssc-115931	Sus scrofa	71.39	6.00e-174	603.00
IUUC-Tgu-116787	Taeniopygia guttata	75.98	0.00e+00	1313.00
IUUC-Tru-118218	Takifugu rubripes	68.32	0.00e+00	1207.00
IUUC-Tsy-119401	Tarsius syrichta	74.63	0.00e+00	759.00
IUUC-Tni-120046	Tetraodon nigroviridis	66.32	0.00e+00	1152.00
IUUC-Tca-121685	Theobroma cacao	40.56	0.00e+00	654.00
IUUC-Tre-122154	Trichoderma reesei	42.80	0.00e+00	661.00
IUUC-Tvi-122451	Trichoderma virens	41.08	0.00e+00	650.00
IUUC-Tae-125397	Triticum aestivum	44.86	2.00e-121	429.00
IUUC-Tur-126650	Triticum urartu	40.56	1.00e-171	596.00
IUUC-Tme-127005	Tuber melanosporum	44.40	0.00e+00	700.00
IUUC-Tbe-128102	Tupaia belangeri	73.77	0.00e+00	811.00
IUUC-Ttr-128259	Tursiops truncatus	71.62	0.00e+00	1188.00
IUUC-Uma-129511	Ustilago maydis	40.88	1.00e-177	616.00
IUUC-Vda-129833	Verticillium dahliae	39.91	6.00e-169	587.00
IUUC-Vvi-131572	Vitis vinifera	41.18	0.00e+00	640.00
IUUC-Xtr-131776	Xenopus tropicalis	54.59	2.00e-117	416.00
IUUC-Xma-133887	Xiphophorus maculatus	69.94	0.00e+00	1194.00
IUUC-Yli-134427	Yarrowia lipolytica	40.34	1.00e-167	583.00
IUUC-Zma-135980	Zea mays	41.27	2.00e-180	626.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence