iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000017641.7	ENSRNOT00000089885.1	ENSRNOP00000068768.1
ENSRNOG00000017641.7	ENSRNOT00000060822.3	ENSRNOP00000057548.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-09	38.1	299	340

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df  ++ ++vlpC+H fha+C+ kw       + + +CP+Cr
   Q: 299  CVVCFSDFevRQLLRVLPCNHEFHAKCVDKW------LKANRTCPICR 340
           ********65333889***************......**********8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MLHPATQQSP FMVDLHDQVH QGPVPLSYTV TTVTTQGFPL PASQHIPGCS AQQLPACSVM 60
FSGQHYPLCC LPPPQLIQAC TMQQLPVPYH TYPHLISSDH YILHPPPPAP PPQPTHMAPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGGAGCCG GACCGGGCTG CCCCGGGAGC AACGCGCCGC TGCCTATTCG GGGTGGAGCC 60
CAGCCGTGGC CCCAGGTAAC GCCCGGGCGC GGGCCGCTGT AGACGCGGCG GGAGGTGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001093	Aegilops tauschii	32.73	4.00e-15	75.90
IUUC-Aml-002180	Ailuropoda melanoleuca	86.89	3.00e-157	547.00
IUUC-Aca-004353	Anolis carolinensis	85.42	2.00e-145	508.00
IUUC-Aly-005825	Arabidopsis lyrata	40.00	1.00e-13	70.90
IUUC-Ath-007389	Arabidopsis thaliana	40.00	9.00e-14	70.90
IUUC-Bta-012954	Bos taurus	91.76	6.00e-164	570.00
IUUC-Bdi-014486	Brachypodium distachyon	33.62	3.00e-15	76.60
IUUC-Bol-015622	Brassica oleracea	40.00	3.00e-13	68.90
IUUC-Bra-017837	Brassica rapa	40.00	6.00e-14	71.20
IUUC-Cja-019606	Callithrix jacchus	92.02	6.00e-165	573.00
IUUC-Cfa-020959	Canis familiaris	93.18	2.00e-167	582.00
IUUC-Cpo-022130	Cavia porcellus	90.31	4.00e-172	597.00
IUUC-Cre-022984	Chlamydomonas reinhardtii	32.97	1.00e-11	65.90
IUUC-Csa-024265	Chlorocebus sabaeus	92.90	1.00e-167	582.00
IUUC-Cin-025552	Ciona intestinalis	62.39	4.00e-37	146.00
IUUC-Dno-030071	Dasypus novemcinctus	91.19	8.00e-165	573.00
IUUC-Dor-030199	Dipodomys ordii	78.98	5.00e-143	500.00
IUUC-Dme-032187	Drosophila melanogaster	65.32	3.00e-44	174.00
IUUC-Eca-034105	Equus caballus	93.18	1.00e-167	582.00
IUUC-Fca-036360	Felis catus	92.90	8.00e-167	579.00
IUUC-Fal-037494	Ficedula albicollis	84.27	1.00e-151	529.00
IUUC-Gga-040521	Gallus gallus	84.55	8.00e-152	530.00
IUUC-Gma-043251	Glycine max	42.00	1.00e-15	77.00
IUUC-Ggo-044732	Gorilla gorilla	88.92	6.00e-158	550.00
IUUC-Hsa-046830	Homo sapiens	93.75	7.00e-171	593.00
IUUC-Hvu-047801	Hordeum vulgare	32.73	5.00e-15	75.90
IUUC-Itr-048694	Ictidomys tridecemlineatus	93.75	2.00e-166	578.00
IUUC-Laf-053419	Loxodonta africana	86.61	1.00e-163	568.00
IUUC-Mcc-054969	Macaca mulatta	93.18	9.00e-170	589.00
IUUC-Meu-056404	Macropus eugenii	85.67	3.00e-161	561.00
IUUC-Mtr-057973	Medicago truncatula	47.22	1.00e-15	77.80
IUUC-Mdo-062309	Monodelphis domestica	84.80	2.00e-150	525.00
IUUC-Mmu-063712	Mus musculus	98.86	3.00e-174	604.00
IUUC-Mac-065494	Musa acuminata	49.28	5.00e-15	75.10
IUUC-Mpu-066508	Mustela putorius furo	93.47	1.00e-167	582.00
IUUC-Mlu-068210	Myotis lucifugus	88.95	3.00e-156	544.00
IUUC-Nle-069124	Nomascus leucogenys	89.77	3.00e-160	557.00
IUUC-Opr-071167	Ochotona princeps	88.66	2.00e-154	538.00
IUUC-Ont-072090	Oreochromis niloticus	72.32	9.00e-110	390.00
IUUC-Ocu-074801	Oryctolagus cuniculus	72.16	5.00e-126	444.00
IUUC-Oba-075816	Oryza barthii	33.64	4.00e-15	75.90
IUUC-Ogl-077408	Oryza glaberrima	33.64	4.00e-15	76.30
IUUC-Ogu-078097	Oryza glumaepatula	36.70	7.00e-16	78.20
IUUC-Oin-079490	Oryza indica	33.66	4.00e-15	76.30
IUUC-Olo-080723	Oryza longistaminata	33.66	6.00e-15	75.90
IUUC-Ome-081876	Oryza meridionalis	32.71	1.00e-14	74.70
IUUC-Oni-082843	Oryza nivara	33.64	4.00e-15	75.90
IUUC-Oru-085152	Oryza rufipogon	33.64	4.00e-15	75.90
IUUC-Osa-086098	Oryza sativa	33.64	4.00e-15	75.90
IUUC-Oga-087987	Otolemur garnettii	93.47	8.00e-170	589.00
IUUC-Oar-089245	Ovis aries	85.24	8.00e-156	543.00
IUUC-Ptr-091155	Pan troglodytes	93.47	6.00e-170	590.00
IUUC-Pan-092597	Papio anubis	93.75	4.00e-171	594.00
IUUC-Pab-098133	Pongo abelii	83.18	3.00e-149	520.00
IUUC-Pop-099843	Populus trichocarpa	38.89	5.00e-16	78.20
IUUC-Pca-100961	Procavia capensis	90.31	2.00e-162	565.00
IUUC-Ppe-102055	Prunus persica	37.78	2.00e-15	76.60
IUUC-Pva-102987	Pteropus vampyrus	85.75	3.00e-152	531.00
IUUC-Sha-107023	Sarcophilus harrisii	82.05	3.00e-152	531.00
IUUC-Sit-110142	Setaria italica	33.93	5.00e-15	75.90
IUUC-Stu-112093	Solanum tuberosum	41.67	4.00e-15	74.70
IUUC-Sar-113463	Sorex araneus	81.76	3.00e-130	457.00
IUUC-Sbi-114529	Sorghum bicolor	45.33	3.00e-15	76.30
IUUC-Ssc-115578	Sus scrofa	93.47	9.00e-167	579.00
IUUC-Tgu-117430	Taeniopygia guttata	84.27	5.00e-145	507.00
IUUC-Tru-117715	Takifugu rubripes	74.93	2.00e-120	426.00
IUUC-Tae-123235	Triticum aestivum	32.73	5.00e-15	75.90
IUUC-Tbe-127519	Tupaia belangeri	84.05	1.00e-137	482.00
IUUC-Ttr-128179	Tursiops truncatus	92.61	2.00e-165	575.00
IUUC-Xtr-132852	Xenopus tropicalis	76.34	2.00e-126	445.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence