iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113849

Ensembl Protein ID

Sb10g030450.1

UniProt Accession

C5Z1Z5; C5Z1Z5_SORBI

Genbank Protein ID

EER90416.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G269500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g030450	Sb10g030450.1	Sb10g030450.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-19	68.2	47	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H + v+ ++f  d  ll+sGsdD t+ +WD+ 
   Q: 47   HRGCVNTISFsADgSLLLSGSDDRTLVLWDWQ 78
           999********5559***************85 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPPERTRMEE LWEREVGSLP PKRFANSVMA SKEYVQSLNI QKRLRKHRGC VNTISFSADG 60
SLLLSGSDDR TLVLWDWQEA APTLSFHTGH RNNVYHALFM PVSDDRSIVS CAADGEVIHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCTGTGGA ACAGTGGAAA AGCCGAGCCG AGGAAGGGCA GGCAGGGAAG GGAAGCGAAC 60
CCCTCGTGAC CGGCGGCGGC GGCGAAGGGA GATGCCGCCG GAGAGGACGA GAATGGAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_10g030540

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000451	Aegilops tauschii	61.68	5.00e-127	447.00
IUUC-Apl-003872	Anas platyrhynchos	30.97	8.00e-34	137.00
IUUC-Bdi-014212	Brachypodium distachyon	66.75	1.00e-157	548.00
IUUC-Dor-030879	Dipodomys ordii	28.87	7.00e-24	105.00
IUUC-Hvu-047472	Hordeum vulgare	61.37	2.00e-137	481.00
IUUC-Lpe-051029	Leersia perrieri	65.84	7.00e-160	556.00
IUUC-Oba-075210	Oryza barthii	69.40	5.00e-168	582.00
IUUC-Obr-076559	Oryza brachyantha	59.85	1.00e-137	482.00
IUUC-Ogl-076983	Oryza glaberrima	69.15	2.00e-168	584.00
IUUC-Ogu-078700	Oryza glumaepatula	69.40	2.00e-168	584.00
IUUC-Oin-080109	Oryza indica	69.40	5.00e-169	586.00
IUUC-Olo-080889	Oryza longistaminata	68.49	8.00e-167	578.00
IUUC-Oni-083050	Oryza nivara	69.40	5.00e-168	582.00
IUUC-Opu-083676	Oryza punctata	69.37	1.00e-165	576.00
IUUC-Oru-084681	Oryza rufipogon	69.40	2.00e-168	584.00
IUUC-Osa-086027	Oryza sativa	69.40	5.00e-169	586.00
IUUC-Olu-087847	Ostreococcus lucimarinus	32.88	1.00e-41	162.00
IUUC-Sit-110699	Setaria italica	72.15	0.00e+00	662.00
IUUC-Tae-123540	Triticum aestivum	64.30	3.00e-141	494.00
IUUC-Tur-126059	Triticum urartu	63.66	8.00e-127	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence