iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006597

Ensembl Protein ID

AT3G61600.1

UniProt Accession

Q9FPW6; Q9M309; POB1_ARATH

Genbank Protein ID

AAG44951.1; CAB71090.1; AEE80229.1; AEE80230.1; ABO38760.1

Protein Name

BTB/POZ domain-containing protein POB1; POZ/BTB CONTAINING-PROTEIN 1

Genbank Nucleotide ID

AF292397; AL132959; CP002686; CP002686; AF337913

Gene Name

POB1; At3g61600; F15G16.4; F2A19.200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G61600	AT3G61600.1	AT3G61600.1
AT3G61600	AT3G61600.2	AT3G61600.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	5.30e-08	34.0	150	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 6    vvggeeffahkivLaasSsvFyalflmeleesksklmveik.d.vqpevfrallkFlYtgkld 66
           vv  +e +    +Laa S++Fy+lf+++++es+ +  v+++    +  ++ +ll+F+Y++ ++
   Q: 150  VVRVKELHISSPILAAKSPFFYKLFSNGMRESE-QRHVTLRiNaSEEAALMELLNFMYSNAVS 211
           5556667777789*******************8.99999997669999**********99876 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Protein Sequence
(Fasta)

MRGTTENTDL FDPKTQMDPD FTRHGSSSDG DFGFAFNDSN FSDRLLRIEI MGGPSDSRSE 60
VEGCTSIADW ARHRKRRRED IKKESGVTIS DIVACPEEQI LTDEQPDMDG CPGGENPDDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAATTCAA AATTTTGTAC CAGCAGCTCA AAGCTACTAG GTAAAAAATG TCACGAGAGA 60
AAACCGGAGG AATATTGGTG GTTCATCAAT ACGAATCAAA CCGAACCAAG TCATAAACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR011705--BACK
IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR008974--TRAF-like

PROSITE

PS50097--BTB

Pfam

PF07707--BACK
PF00651--BTB

SMART

SM00875--BACK
SM00225--BTB

Gene Ontology

GO:0031463--C:Cul3-RING ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0046982--F:protein heterodimerization activity
GO:0042803--F:protein homodimerization activity
GO:0016567--P:protein ubiquitination
GO:0010114--P:response to red light

KEGG

ath:AT3G61600

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001164	Aegilops tauschii	69.97	5.00e-162	563.00
IUUC-Aly-005972	Arabidopsis lyrata	98.93	0.00e+00	1149.00
IUUC-Bdi-014155	Brachypodium distachyon	63.29	0.00e+00	676.00
IUUC-Bol-015517	Brassica oleracea	94.13	0.00e+00	1083.00
IUUC-Bra-017177	Brassica rapa	94.47	0.00e+00	1091.00
IUUC-Cre-022674	Chlamydomonas reinhardtii	32.79	5.00e-08	51.60
IUUC-Gma-043483	Glycine max	81.68	0.00e+00	875.00
IUUC-Hvu-047780	Hordeum vulgare	71.46	1.00e-179	622.00
IUUC-Lpe-050843	Leersia perrieri	63.93	0.00e+00	685.00
IUUC-Mtr-058665	Medicago truncatula	74.58	0.00e+00	862.00
IUUC-Mac-065068	Musa acuminata	65.98	0.00e+00	692.00
IUUC-Oba-075608	Oryza barthii	60.86	0.00e+00	650.00
IUUC-Obr-076420	Oryza brachyantha	62.79	0.00e+00	654.00
IUUC-Ogl-077273	Oryza glaberrima	62.48	0.00e+00	648.00
IUUC-Ogu-078858	Oryza glumaepatula	60.86	0.00e+00	648.00
IUUC-Oin-079353	Oryza indica	62.48	0.00e+00	648.00
IUUC-Olo-080699	Oryza longistaminata	68.78	7.00e-179	619.00
IUUC-Ome-081588	Oryza meridionalis	60.86	0.00e+00	648.00
IUUC-Oni-082737	Oryza nivara	60.86	0.00e+00	648.00
IUUC-Opu-084092	Oryza punctata	60.18	0.00e+00	630.00
IUUC-Oru-084399	Oryza rufipogon	62.48	0.00e+00	648.00
IUUC-Osa-085927	Oryza sativa	62.48	0.00e+00	648.00
IUUC-Ppa-095629	Physcomitrella patens	61.31	0.00e+00	642.00
IUUC-Pop-099662	Populus trichocarpa	81.29	0.00e+00	941.00
IUUC-Ppe-101178	Prunus persica	82.52	0.00e+00	912.00
IUUC-Smo-109336	Selaginella moellendorffii	61.88	1.00e-172	598.00
IUUC-Sit-110540	Setaria italica	63.23	0.00e+00	643.00
IUUC-Sly-111648	Solanum lycopersicum	74.86	0.00e+00	801.00
IUUC-Stu-112724	Solanum tuberosum	74.73	0.00e+00	814.00
IUUC-Sbi-114541	Sorghum bicolor	63.05	0.00e+00	665.00
IUUC-Tgu-117035	Taeniopygia guttata	26.50	8.00e-14	71.60
IUUC-Tca-121677	Theobroma cacao	83.30	0.00e+00	954.00
IUUC-Tvi-122261	Trichoderma virens	40.43	3.00e-01	29.60
IUUC-Tae-125512	Triticum aestivum	62.57	0.00e+00	667.00
IUUC-Tur-126813	Triticum urartu	63.04	0.00e+00	670.00
IUUC-Vvi-131141	Vitis vinifera	82.10	0.00e+00	938.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence